RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 PRDM11Q9NQV5 511 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 SLC4A4Q9Y6R1 1079 aa17.22■□□□□ 0.35
C9orf3-204ENST00000424143 A0A087X0B3 334 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 H7C1D1 291 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 MYL1P05976 194 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 CAPN2P17655 700 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 CASP14P31944 242 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 COPB1P53618 953 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 RAD51AP2Q09MP3 1159 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 HLFQ16534 295 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 ARL6IP4Q66PJ3 421 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 NHSL1Q5SYE7 1610 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 STRCP1A6NGW2 1772 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 TARSL2A2RTX5 802 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 H3BQF6 201 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 PSMD14O00487 310 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 CYP19A1P11511 503 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 IL6STP40189 918 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 KRT31Q15323 416 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 SLC35F6Q8N357 371 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 NEK11Q8NG66 645 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 CTCFLQ8NI51 663 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 CCDC85AQ96PX6 553 aaPredicted RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 HAUS4Q9H6D7 363 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 ZCCHC17Q9NP64 241 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 INCENPQ9NQS7 918 aa17.21■□□□□ 0.35
C9orf3-204ENST00000424143 MKRN1Q9UHC7 482 aaKnown RBP17.21■□□□□ 0.35
C9orf3-204ENST00000424143 MYH2Q9UKX2 1941 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 ITGB4P16144 1822 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
C9orf3-204ENST00000424143 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
C9orf3-204ENST00000424143 PTPN21Q16825 1174 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 ZNF658Q5TYW1 1059 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-204ENST00000424143 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 LCORLQ8N3X6 602 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 RUBCNQ92622 972 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 EPSTI1Q96J88 318 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 BRIP1Q9BX63 1249 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 LZTFL1Q9NQ48 299 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 FEZ2Q9UHY8 353 aaPredicted RBP17.2■□□□□ 0.34
C9orf3-204ENST00000424143 MYO6Q9UM54 1294 aa17.2■□□□□ 0.34
C9orf3-204ENST00000424143 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-204ENST00000424143 ZBTB22O15209 634 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 PAK1Q13153 545 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 TTC38Q5R3I4 469 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 CATIPQ7Z7H3 387 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 SYNE4Q8N205 404 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 EHBP1Q8NDI1 1231 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 NOC3LQ8WTT2 800 aaKnown RBP17.19■□□□□ 0.34
C9orf3-204ENST00000424143 PIGBQ92521 554 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
C9orf3-204ENST00000424143 PNKPQ96T60 521 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 IRX2Q9BZI1 471 aaPredicted RBP17.19■□□□□ 0.34
C9orf3-204ENST00000424143 ABCB6Q9NP58 842 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
C9orf3-204ENST00000424143 N4BP3O15049 544 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 ERVK-24P63145 666 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 HSP90AA4PQ58FG1 418 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 TCP11X2Q5H9J9 407 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 TRAPPC11Q7Z392 1133 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 SHISA4Q96DD7 197 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 IQCDQ96DY2 449 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 ZSCAN10Q96SZ4 725 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 PDE11AQ9HCR9 933 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 EPN1Q9Y6I3 576 aaPredicted RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 DUOX1Q9NRD9 1551 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 LAMB2P55268 1798 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 TNKSO95271 1327 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 XDHP47989 1333 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 EEF1GP26641 437 aaKnown RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 AFMP43652 599 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 KCNB1Q14721 858 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 CASP8Q14790 479 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 NPY5RQ15761 445 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 MAP9Q49MG5 647 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 PAPD7Q5XG87 772 aaKnown RBP17.18■□□□□ 0.34
C9orf3-204ENST00000424143 LEKR1Q6ZMV7 388 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 DNAJC7Q99615 494 aa17.18■□□□□ 0.34
C9orf3-204ENST00000424143 ZNF804BA4D1E1 1349 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 PRKAB2O43741 272 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 TROAPQ12815 778 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 RRP12Q5JTH9 1297 aaKnown RBP17.17■□□□□ 0.34
C9orf3-204ENST00000424143 TMTC3Q6ZXV5 915 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 RETREG2Q8NC44 543 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 OR8K1Q8NGG5 319 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 PUF60Q9UHX1 559 aaKnown RBP17.17■□□□□ 0.34
C9orf3-204ENST00000424143 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
C9orf3-204ENST00000424143 BCL9O00512 1426 aa17.16■□□□□ 0.34
C9orf3-204ENST00000424143 MYH8P13535 1937 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms