RNA–Protein interactions for RNA: ENST00000423717.1

EPDR1-202, Transcript of ependymin related 1, humanhuman

TSL 1 (best) BASIC

Gene EPDR1, Length 638 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-202ENST00000423717 PRDM10Q9NQV6 1147 aa26.77■■□□□ 1.88
EPDR1-202ENST00000423717 PLIN4Q96Q06 1357 aa26.76■■□□□ 1.87
EPDR1-202ENST00000423717 B4E1Z4 1266 aa26.76■■□□□ 1.87
EPDR1-202ENST00000423717 SAMD1Q6SPF0 538 aaPredicted RBP26.76■■□□□ 1.87
EPDR1-202ENST00000423717 LRRC47Q8N1G4 583 aaKnown RBP26.76■■□□□ 1.87
EPDR1-202ENST00000423717 TANGO6Q9C0B7 1094 aa26.76■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L15C9J2P7 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L13C9JLJ4 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L11C9JVI0 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L18D6R9N7 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L22D6RA61 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L17D6RBQ6 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L19D6RCP7 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L20D6RJB6 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 KDM4AO75164 1064 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 USP17L24Q0WX57 530 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 TRDNQ13061 729 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 PPP4R3BQ5MIZ7 849 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 CHMP4CQ96CF2 233 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 ZKSCAN3Q9BRR0 538 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 KRT23Q9C075 422 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 CNNM2Q9H8M5 875 aa26.75■■□□□ 1.87
EPDR1-202ENST00000423717 SP3Q02447 781 aa26.74■■□□□ 1.87
EPDR1-202ENST00000423717 KIAA1755Q5JYT7 1200 aa26.74■■□□□ 1.87
EPDR1-202ENST00000423717 IL17RBQ9NRM6 502 aa26.74■■□□□ 1.87
EPDR1-202ENST00000423717 ISY1Q9ULR0 285 aaKnown RBP26.74■■□□□ 1.87
EPDR1-202ENST00000423717 HOXA7P31268 230 aaPredicted RBP26.73■■□□□ 1.87
EPDR1-202ENST00000423717 LPAR1Q92633 364 aa26.73■■□□□ 1.87
EPDR1-202ENST00000423717 P2RX7Q99572 595 aaKnown RBP26.73■■□□□ 1.87
EPDR1-202ENST00000423717 MTMR7Q9Y216 660 aa26.73■■□□□ 1.87
EPDR1-202ENST00000423717 GTF3C3Q9Y5Q9 886 aa26.73■■□□□ 1.87
EPDR1-202ENST00000423717 CATSPERGQ6ZRH7 1159 aa26.72■■□□□ 1.87
EPDR1-202ENST00000423717 RALYLQ86SE5 291 aaKnown RBP26.72■■□□□ 1.87
EPDR1-202ENST00000423717 NKX2-3Q8TAU0 364 aa26.72■■□□□ 1.87
EPDR1-202ENST00000423717 E7EWF7 191 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 F5H6K3 240 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 KLRC3Q07444 240 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 C17orf99Q6UX52 265 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 IQCA1Q86XH1 822 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 ANKRD13CQ8N6S4 541 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 CD99L2Q8TCZ2 262 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 TAF6LQ9Y6J9 622 aa26.71■■□□□ 1.87
EPDR1-202ENST00000423717 SLC27A2O14975 620 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 WDR46O15213 610 aaKnown RBP26.7■■□□□ 1.86
EPDR1-202ENST00000423717 HERVK_113P62684 666 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 KIF22Q14807 665 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 NOM1Q5C9Z4 860 aaKnown RBP26.7■■□□□ 1.86
EPDR1-202ENST00000423717 FAM83BQ5T0W9 1011 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 CREB3L3Q68CJ9 461 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 MKL1Q969V6 931 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 ERO1AQ96HE7 468 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 NUP88Q99567 741 aaPredicted RBP26.7■■□□□ 1.86
EPDR1-202ENST00000423717 ZSWIM5Q9P217 1185 aa26.7■■□□□ 1.86
EPDR1-202ENST00000423717 ADGRA2Q96PE1 1338 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 NDUFB10O96000 172 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 RNF20Q5VTR2 975 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 SLFN13Q68D06 897 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 NCOA7Q8NI08 942 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 PAGR1Q9BTK6 254 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 TCP11L1Q9NUJ3 509 aa26.69■■□□□ 1.86
EPDR1-202ENST00000423717 FLOT1O75955 427 aa26.68■■□□□ 1.86
EPDR1-202ENST00000423717 REC8O95072 547 aa26.68■■□□□ 1.86
EPDR1-202ENST00000423717 GCLCP48506 637 aaPredicted RBP26.68■■□□□ 1.86
EPDR1-202ENST00000423717 COL13A1Q5TAT6 717 aaPredicted RBP26.68■■□□□ 1.86
EPDR1-202ENST00000423717 UBAC1Q9BSL1 405 aa26.68■■□□□ 1.86
EPDR1-202ENST00000423717 NT5C2P49902 561 aa26.67■■□□□ 1.86
EPDR1-202ENST00000423717 COG2Q14746 738 aa26.67■■□□□ 1.86
EPDR1-202ENST00000423717 NECTIN1Q15223 517 aa26.67■■□□□ 1.86
EPDR1-202ENST00000423717 STOX1Q6ZVD7 989 aa26.67■■□□□ 1.86
EPDR1-202ENST00000423717 TMEM47Q9BQJ4 181 aa26.67■■□□□ 1.86
EPDR1-202ENST00000423717 BCRP11274 1271 aa26.66■■□□□ 1.86
EPDR1-202ENST00000423717 TOP1P11387 765 aaKnown RBP26.66■■□□□ 1.86
EPDR1-202ENST00000423717 CCDC178Q5BJE1 867 aa26.66■■□□□ 1.86
EPDR1-202ENST00000423717 CYB5R4Q7L1T6 521 aa26.66■■□□□ 1.86
EPDR1-202ENST00000423717 GMCL1P1Q8NEA9 526 aa26.66■■□□□ 1.86
EPDR1-202ENST00000423717 ZSCAN10Q96SZ4 725 aaPredicted RBP26.66■■□□□ 1.86
EPDR1-202ENST00000423717 PEX10O60683 326 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 MCCP23508 829 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 CHST3Q7LGC8 479 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 TTC14Q96N46 770 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 HOXC10Q9NYD6 342 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 SYNPO2Q9UMS6 1093 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 TNKSO95271 1327 aa26.65■■□□□ 1.86
EPDR1-202ENST00000423717 FMNL1O95466 1100 aaPredicted RBP26.64■■□□□ 1.86
EPDR1-202ENST00000423717 BMP3P12645 472 aa26.64■■□□□ 1.86
EPDR1-202ENST00000423717 LACTBP83111 547 aaPredicted RBP26.64■■□□□ 1.86
EPDR1-202ENST00000423717 IKQ13123 557 aaPredicted RBP26.64■■□□□ 1.86
EPDR1-202ENST00000423717 GTF3C2Q8WUA4 911 aaPredicted RBP26.64■■□□□ 1.86
EPDR1-202ENST00000423717 ARHGAP39Q9C0H5 1083 aa26.64■■□□□ 1.86
EPDR1-202ENST00000423717 FBXO28Q9NVF7 368 aa26.64■■□□□ 1.86
EPDR1-202ENST00000423717 TRIM17Q9Y577 477 aa26.64■■□□□ 1.86
EPDR1-202ENST00000423717 ERICH2A1L162 156 aa26.63■■□□□ 1.85
EPDR1-202ENST00000423717 SPDYE16A6NNV3 312 aaPredicted RBP26.63■■□□□ 1.85
EPDR1-202ENST00000423717 ZKSCAN1P17029 563 aaPredicted RBP26.63■■□□□ 1.85
EPDR1-202ENST00000423717 SLC1A4P43007 532 aa26.63■■□□□ 1.85
EPDR1-202ENST00000423717 ARHGEF6Q15052 776 aa26.63■■□□□ 1.85
EPDR1-202ENST00000423717 FAM110CQ1W6H9 321 aa26.63■■□□□ 1.85
EPDR1-202ENST00000423717 CCDC96Q2M329 555 aa26.63■■□□□ 1.85
EPDR1-202ENST00000423717 CTU1Q7Z7A3 348 aaKnown RBP26.63■■□□□ 1.85
EPDR1-202ENST00000423717 DGKHQ86XP1 1220 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms