RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.35□□□□□ -0.91
TRPS1-204ENST00000422939 PCDHGB7Q9Y5F8 929 aa9.35□□□□□ -0.91
TRPS1-204ENST00000422939 CHMP4BP1P59074 171 aa9.34□□□□□ -0.91
TRPS1-204ENST00000422939 RACK1P63244 317 aaKnown RBP9.34□□□□□ -0.91
TRPS1-204ENST00000422939 TSPYL5Q86VY4 417 aaPredicted RBP9.34□□□□□ -0.91
TRPS1-204ENST00000422939 CREG2Q8IUH2 290 aa9.34□□□□□ -0.91
TRPS1-204ENST00000422939 MRRFQ96E11 262 aaKnown RBP9.34□□□□□ -0.91
TRPS1-204ENST00000422939 CCDC120Q96HB5 630 aa9.34□□□□□ -0.91
TRPS1-204ENST00000422939 GDNFP39905 211 aa9.33□□□□□ -0.92
TRPS1-204ENST00000422939 CCNFP41002 786 aa9.33□□□□□ -0.92
TRPS1-204ENST00000422939 NLRC3Q7RTR2 1065 aa9.33□□□□□ -0.92
TRPS1-204ENST00000422939 TMEM40Q8WWA1 233 aa9.33□□□□□ -0.92
TRPS1-204ENST00000422939 ALPK1Q96QP1 1244 aa9.33□□□□□ -0.92
TRPS1-204ENST00000422939 MEIS3P2A8K0S8 358 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.32□□□□□ -0.92
TRPS1-204ENST00000422939 AFMP43652 599 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 RNF4P78317 190 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 RAD51AP2Q09MP3 1159 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 METTL16Q86W50 562 aaKnown RBP9.32□□□□□ -0.92
TRPS1-204ENST00000422939 FAM168AQ92567 244 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 ANTXR1Q9H6X2 564 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
TRPS1-204ENST00000422939 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.32□□□□□ -0.92
TRPS1-204ENST00000422939 NME1P15531 152 aaKnown RBP9.31□□□□□ -0.92
TRPS1-204ENST00000422939 ZNF654Q8IZM8 581 aa9.31□□□□□ -0.92
TRPS1-204ENST00000422939 DUSP13Q9UII6 198 aa9.31□□□□□ -0.92
TRPS1-204ENST00000422939 POLR2BP30876 1174 aaKnown RBP9.3□□□□□ -0.92
TRPS1-204ENST00000422939 NBPF12Q5TAG4 269 aaPredicted RBP9.3□□□□□ -0.92
TRPS1-204ENST00000422939 SLAMF8Q9P0V8 285 aa9.3□□□□□ -0.92
TRPS1-204ENST00000422939 KIAA1522Q9P206 1035 aaPredicted RBP9.3□□□□□ -0.92
TRPS1-204ENST00000422939 ZNRF3Q9ULT6 936 aa9.3□□□□□ -0.92
TRPS1-204ENST00000422939 KRTAP9-6A0A140TA67 174 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 UNCXA6NJT0 531 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 TNFRSF10CO14798 259 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 IMPDH2P12268 514 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 ZSWIM9Q86XI8 627 aa9.29□□□□□ -0.92
TRPS1-204ENST00000422939 ENOX1Q8TC92 643 aaKnown RBP9.29□□□□□ -0.92
TRPS1-204ENST00000422939 DNAJC25-GNG10A0A024R161 153 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 EGR3Q06889 387 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 CLEC16AQ2KHT3 1053 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 NBPF9Q3BBW0 867 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 RALGPS1Q5JS13 557 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 INTS3Q68E01 1043 aaKnown RBP9.28□□□□□ -0.92
TRPS1-204ENST00000422939 OGFOD2Q6N063 350 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 TTC6Q86TZ1 520 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 KRTAP4-12Q9BQ66 201 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
TRPS1-204ENST00000422939 GOLGA2P5Q9HBQ8 144 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 TMEM59LQ9UK28 342 aa9.28□□□□□ -0.92
TRPS1-204ENST00000422939 CLEC3AO75596 197 aa9.27□□□□□ -0.93
TRPS1-204ENST00000422939 KCNMB1Q16558 191 aa9.27□□□□□ -0.93
TRPS1-204ENST00000422939 FYB2Q5VWT5 728 aa9.27□□□□□ -0.93
TRPS1-204ENST00000422939 ADAMTS10Q9H324 1103 aa9.27□□□□□ -0.93
TRPS1-204ENST00000422939 PCDHA11Q9Y5I1 949 aa9.27□□□□□ -0.93
TRPS1-204ENST00000422939 LTKP29376 864 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 HDLBPQ00341 1268 aaKnown RBP9.26□□□□□ -0.93
TRPS1-204ENST00000422939 PAK2Q13177 524 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 NMIQ13287 307 aaPredicted RBP9.26□□□□□ -0.93
TRPS1-204ENST00000422939 TMEM192Q8IY95 271 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 POU5F2Q8N7G0 328 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 KIRREL1Q96J84 757 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 FERD3LQ96RJ6 166 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 SLC9A7Q96T83 725 aa9.26□□□□□ -0.93
TRPS1-204ENST00000422939 COL9A2Q14055 689 aaPredicted RBP9.25□□□□□ -0.93
TRPS1-204ENST00000422939 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
TRPS1-204ENST00000422939 SYTL5Q8TDW5 730 aaPredicted RBP9.25□□□□□ -0.93
TRPS1-204ENST00000422939 SPATA32Q96LK8 384 aa9.25□□□□□ -0.93
TRPS1-204ENST00000422939 CCDC9Q9Y3X0 531 aaKnown RBP9.25□□□□□ -0.93
TRPS1-204ENST00000422939 ZNF503-AS2A6NEH8 195 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 RAC2P15153 192 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 HK2P52789 917 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 C9orf131Q5VYM1 1079 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 TAB3Q8N5C8 712 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-204ENST00000422939 RBBP8NLQ8NC74 664 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-204ENST00000422939 DAGLBQ8NCG7 672 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 SLC6A18Q96N87 628 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 HDAC8Q9BY41 377 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 FAM53CQ9NYF3 392 aa9.24□□□□□ -0.93
TRPS1-204ENST00000422939 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.24□□□□□ -0.93
TRPS1-204ENST00000422939 GLI1P08151 1106 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 ACRP10323 421 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 TMEM67Q5HYA8 995 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 TMC3Q7Z5M5 1100 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 SYTL4Q96C24 671 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-204ENST00000422939 ZNF512BQ96KM6 892 aaPredicted RBP9.23□□□□□ -0.93
TRPS1-204ENST00000422939 DHRS1Q96LJ7 313 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 TM9SF2Q99805 663 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 PPT2Q9UMR5 302 aa9.23□□□□□ -0.93
TRPS1-204ENST00000422939 HPXP02790 462 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 TEKQ02763 1124 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 SNW1Q13573 536 aaKnown RBP9.22□□□□□ -0.93
TRPS1-204ENST00000422939 FBXW10Q5XX13 1052 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 USHBP1Q8N6Y0 703 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 ZNF655Q8N720 491 aaPredicted RBP9.22□□□□□ -0.93
TRPS1-204ENST00000422939 DHX38Q92620 1227 aaKnown RBP9.22□□□□□ -0.93
TRPS1-204ENST00000422939 PRDM14Q9GZV8 571 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 GINM1Q9NU53 330 aa9.22□□□□□ -0.93
TRPS1-204ENST00000422939 ZGLP1P0C6A0 271 aa9.21□□□□□ -0.94
TRPS1-204ENST00000422939 ERVFC1P60507 584 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms