RNA–Protein interactions for RNA: ENST00000422468.1

TRIM43CP-201, Transcript of tripartite motif containing 43C, pseudogene, humanhuman

BASIC

Gene TRIM43CP, Length 1,028 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43CP-201ENST00000422468 C12orf42Q96LP6 360 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 UNC93B1Q9H1C4 597 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 ARMT1Q9H993 441 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 DCP1AQ9NPI6 582 aaPredicted RBP9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 ATP8A2Q9NTI2 1148 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 ECHDC1Q9NTX5 307 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 GJD2Q9UKL4 321 aa9.87□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L15C9J2P7 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L13C9JLJ4 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L11C9JVI0 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L18D6R9N7 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L22D6RA61 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L17D6RBQ6 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L19D6RCP7 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L20D6RJB6 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 PRKAB2O43741 272 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 MBD4O95243 580 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 CYP2D6P10635 497 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 CAPN2P17655 700 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 USP17L24Q0WX57 530 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 AAMPQ13685 434 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 UBE3CQ15386 1083 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 ZYXQ15942 572 aaKnown RBP9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 ACER1Q8TDN7 264 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 GPATCH3Q96I76 525 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 TXNRD2Q9NNW7 524 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 RBPJLQ9UBG7 517 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 SWAP70Q9UH65 585 aa9.86□□□□□ -0.83
TRIM43CP-201ENST00000422468 MPHOSPH10O00566 681 aaKnown RBP9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 SGPL1O95470 568 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 VCAM1P19320 739 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 MAPK4P31152 587 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 GUCY1A2P33402 732 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 ERVK-9P63128 1117 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 ERVK-24P63145 666 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 SEPT2Q15019 361 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 B4GALNT3Q6L9W6 998 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 POTEEQ6S8J3 1075 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 CATSPERGQ6ZRH7 1159 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 UBE2Q1Q7Z7E8 422 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 U2AF1L4Q8WU68 220 aaKnown RBP9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 SEC62Q99442 399 aaKnown RBP9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 IL25Q9H293 177 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 PAK6Q9NQU5 681 aaPredicted RBP9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 TACC3Q9Y6A5 838 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 RLFQ13129 1914 aa9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 GREB1LQ9C091 1923 aaPredicted RBP9.85□□□□□ -0.83
TRIM43CP-201ENST00000422468 PARP14Q460N5 1801 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 PEX10O60683 326 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 TFRCP02786 760 aaKnown RBP9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 HMGCRP04035 888 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 XRCC5P13010 732 aaKnown RBP9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 Q3C1V9 767 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 C12orf60Q5U649 245 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 TMEM179Q6ZVK1 233 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 CCAR1Q8IX12 1150 aaKnown RBP9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 AMOTL1Q8IY63 956 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 SLC44A5Q8NCS7 719 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 SOCS4Q8WXH5 440 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 DYNLL2Q96FJ2 89 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 NUDT12Q9BQG2 462 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 PAGR1Q9BTK6 254 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 PUS7LQ9H0K6 701 aaKnown RBP9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 RABGAP1Q9Y3P9 1069 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 SLC4A4Q9Y6R1 1079 aa9.84□□□□□ -0.83
TRIM43CP-201ENST00000422468 A0A0G2JMZ2 1700 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 CYP2D7A0A087X1C5 515 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 A0A1W2PRG0 241 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 USP17L12C9JPN9 530 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 USP17L21D6R901 530 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 M0R2C6 588 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 CNMDO75829 334 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 FARP2O94887 1054 aaPredicted RBP9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 LBX2Q6XYB7 198 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 PLEKHH3Q7Z736 793 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 TRMT44Q8IYL2 757 aaKnown RBP9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 KBTBD3Q8NAB2 608 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 USP6NLQ92738 828 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 OSBP2Q969R2 916 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 CCDC136Q96JN2 1154 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 CCDC17Q96LX7 622 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 DEFB118Q96PH6 123 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 HTATIP2Q9BUP3 242 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 LNPKQ9C0E8 428 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 CRISPLD2Q9H0B8 497 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 PORCNQ9H237 461 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 RPAP3Q9H6T3 665 aaPredicted RBP9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 STAP2Q9UGK3 403 aa9.83□□□□□ -0.84
TRIM43CP-201ENST00000422468 RPTORQ8N122 1335 aa9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 RNF113AO15541 343 aaKnown RBP9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 GLRX3O76003 335 aaKnown RBP9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 ZFYP08048 801 aaPredicted RBP9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 AKR1B1P15121 316 aa9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 CYP2B6P20813 491 aa9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 CDK8P49336 464 aa9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 PDE1AP54750 535 aa9.82□□□□□ -0.84
TRIM43CP-201ENST00000422468 CCNA1P78396 465 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms