RNA–Protein interactions for RNA: ENST00000422045.1

AC008440.3-201, humanhuman

TSL 4 BASIC

Gene AC008440.3, Length 555 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008440.3-201ENST00000422045 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
AC008440.3-201ENST00000422045 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
AC008440.3-201ENST00000422045 VCPKMTQ9H867 229 aa12.9□□□□□ -0.34
AC008440.3-201ENST00000422045 SYNPO2Q9UMS6 1093 aa12.9□□□□□ -0.34
AC008440.3-201ENST00000422045 PTPN22Q9Y2R2 807 aa12.9□□□□□ -0.34
AC008440.3-201ENST00000422045 TNPO2O14787 897 aaKnown RBP12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 WDR46O15213 610 aaKnown RBP12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 RANBP6O60518 1105 aaKnown RBP12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 PRDM1O75626 825 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 CAPN15O75808 1086 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 VCAM1P19320 739 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 EVX2Q03828 476 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 CCDC178Q5BJE1 867 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 VPS53Q5VIR6 699 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 MB21D1Q8N884 522 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 NEDD1Q8NHV4 660 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 CLIP2Q9UDT6 1046 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 CTDP1Q9Y5B0 961 aaPredicted RBP12.89□□□□□ -0.35
AC008440.3-201ENST00000422045 ADGRA2Q96PE1 1338 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 ORC4O43929 436 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 GSPT1P15170 499 aaKnown RBP12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 MAPK4P31152 587 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 CTDSPL2Q05D32 466 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 RRP12Q5JTH9 1297 aaKnown RBP12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 ZNF589Q86UQ0 364 aaPredicted RBP12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 TRIM47Q96LD4 638 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 MTMR4Q9NYA4 1195 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 MORF4L1Q9UBU8 362 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 SRRDQ9UH36 339 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
AC008440.3-201ENST00000422045 A0A1W2PRG0 241 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 FLOT1O75955 427 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 CHMLP26374 656 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 TRDNQ13061 729 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 FAM47AQ5JRC9 791 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 AKNAD1Q5T1N1 836 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 ESR2Q92731 530 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 MKL1Q969V6 931 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 CNNM2Q9H8M5 875 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 PPP4R2Q9NY27 417 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 MYPNQ86TC9 1320 aa12.87□□□□□ -0.35
AC008440.3-201ENST00000422045 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 ECM2O94769 699 aaPredicted RBP12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 HAND2P61296 217 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 ERVK-9P63128 1117 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 ERVK-24P63145 666 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 BMP2KLQ5H9B9 411 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 LBX2Q6XYB7 198 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 IQCA1Q86XH1 822 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 SPICE1Q8N0Z3 855 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 STAG1Q8WVM7 1258 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 TMEM106CQ9BVX2 250 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 KRT23Q9C075 422 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 IVNS1ABPQ9Y6Y0 642 aa12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
AC008440.3-201ENST00000422045 F5H6K3 240 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 FGRP09769 529 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 UBXN2AP68543 259 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 KLRC3Q07444 240 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 SLAIN1Q8ND83 568 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 TTC14Q96N46 770 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 ARHGAP39Q9C0H5 1083 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC008440.3-201ENST00000422045 PLIN4Q96Q06 1357 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 FOXP2O15409 715 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 FDX1P10109 184 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 DSG3P32926 999 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 COPB2P35606 906 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 IKQ13123 557 aaPredicted RBP12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 WDR78Q5VTH9 848 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 SLFN13Q68D06 897 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 PRPF38AQ8NAV1 312 aaKnown RBP12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 CHURC1Q8WUH1 139 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 TCP11L1Q9NUJ3 509 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 SLC5A4Q9NY91 659 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 FEM1BQ9UK73 627 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 PTCH2Q9Y6C5 1203 aa12.84□□□□□ -0.35
AC008440.3-201ENST00000422045 IGKV6D-41A0A0C4DH26 115 aa12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 SGSM2O43147 1006 aa12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 STRNO43815 780 aa12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 ZBED4O75132 1171 aa12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 SLC25A27O95847 323 aa12.83□□□□□ -0.36
AC008440.3-201ENST00000422045 TOP1P11387 765 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms