RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 PTCH2Q9Y6C5 1203 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 MYH8P13535 1937 aa17.6■□□□□ 0.41
FAM3A-209ENST00000421517 FGAP02671 866 aa17.59■□□□□ 0.41
FAM3A-209ENST00000421517 EEF2P13639 858 aaKnown RBP17.59■□□□□ 0.41
FAM3A-209ENST00000421517 MAPK4P31152 587 aa17.59■□□□□ 0.41
FAM3A-209ENST00000421517 CCNA1P78396 465 aa17.59■□□□□ 0.41
FAM3A-209ENST00000421517 SLC9C1Q4G0N8 1177 aa17.59■□□□□ 0.41
FAM3A-209ENST00000421517 CENPQQ7L2Z9 268 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-209ENST00000421517 ZNF333Q96JL9 665 aa17.59■□□□□ 0.41
FAM3A-209ENST00000421517 RPAP3Q9H6T3 665 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-209ENST00000421517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
FAM3A-209ENST00000421517 RAD50Q92878 1312 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.4
FAM3A-209ENST00000421517 ORC4O43929 436 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 NOVP48745 357 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 ERVK-9P63128 1117 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 ERVK-24P63145 666 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 VPS53Q5VIR6 699 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 CCDC129Q6ZRS4 1044 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 SLAIN1Q8ND83 568 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 DSCC1Q9BVC3 393 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 DIAPH3Q9NSV4 1193 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 MTMR4Q9NYA4 1195 aa17.58■□□□□ 0.4
FAM3A-209ENST00000421517 CAPN15O75808 1086 aa17.57■□□□□ 0.4
FAM3A-209ENST00000421517 TTLL1O95922 423 aa17.57■□□□□ 0.4
FAM3A-209ENST00000421517 ZNF589Q86UQ0 364 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-209ENST00000421517 RAET1EQ8TD07 263 aa17.57■□□□□ 0.4
FAM3A-209ENST00000421517 ADAMTS5Q9UNA0 930 aa17.57■□□□□ 0.4
FAM3A-209ENST00000421517 SPDYE16A6NNV3 312 aaPredicted RBP17.56■□□□□ 0.4
FAM3A-209ENST00000421517 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 XRCC5P13010 732 aaKnown RBP17.56■□□□□ 0.4
FAM3A-209ENST00000421517 GSPT1P15170 499 aaKnown RBP17.56■□□□□ 0.4
FAM3A-209ENST00000421517 GRK4P32298 578 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 PRKCZQ05513 592 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 ZYXQ15942 572 aaKnown RBP17.56■□□□□ 0.4
FAM3A-209ENST00000421517 GMCL1P1Q8NEA9 526 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 SOCS4Q8WXH5 440 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 TXNRD2Q9NNW7 524 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 TCP11L1Q9NUJ3 509 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 GJD2Q9UKL4 321 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 MGAMO43451 1857 aa17.56■□□□□ 0.4
FAM3A-209ENST00000421517 DSG3P32926 999 aa17.55■□□□□ 0.4
FAM3A-209ENST00000421517 FLT3LGP49771 235 aa17.55■□□□□ 0.4
FAM3A-209ENST00000421517 POTEEQ6S8J3 1075 aa17.55■□□□□ 0.4
FAM3A-209ENST00000421517 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
FAM3A-209ENST00000421517 TRMT44Q8IYL2 757 aaKnown RBP17.55■□□□□ 0.4
FAM3A-209ENST00000421517 SHCBP1Q8NEM2 672 aa17.55■□□□□ 0.4
FAM3A-209ENST00000421517 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
FAM3A-209ENST00000421517 RNF41Q9H4P4 317 aaPredicted RBP17.55■□□□□ 0.4
FAM3A-209ENST00000421517 F5H6K3 240 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 CNMDO75829 334 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 TFAP4Q01664 338 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 KLRC3Q07444 240 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 Q3C1V9 767 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 KIAA1755Q5JYT7 1200 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 STAG1Q8WVM7 1258 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 CEP95Q96GE4 821 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 CTNNA3Q9UI47 895 aa17.54■□□□□ 0.4
FAM3A-209ENST00000421517 RBBP6Q7Z6E9 1792 aaKnown RBP17.53■□□□□ 0.4
FAM3A-209ENST00000421517 STRNO43815 780 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 PRDM1O75626 825 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 FDX1P10109 184 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 UBXN2AP68543 259 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 ERICH6BQ5W0A0 696 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 USP6NLQ92738 828 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 NUDT12Q9BQG2 462 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 TANGO6Q9C0B7 1094 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 GABRQQ9UN88 632 aa17.53■□□□□ 0.4
FAM3A-209ENST00000421517 A0A0G2JMZ2 1700 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 TSPY2A6NKD2 308 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 ZNF213O14771 459 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 PLA2G6O60733 806 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 FLOT1O75955 427 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 COPB2P35606 906 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 AKNAD1Q5T1N1 836 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 PLEKHH3Q7Z736 793 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 CLEC10AQ8IUN9 316 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 TTC14Q96N46 770 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 TMEM106CQ9BVX2 250 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 CLIP2Q9UDT6 1046 aa17.52■□□□□ 0.4
FAM3A-209ENST00000421517 ZSWIM8A7E2V4 1837 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 ATP2A1O14983 1001 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 ADCY3O60266 1144 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 SLC25A27O95847 323 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 CHMLP26374 656 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 MLLT1Q03111 559 aaPredicted RBP17.51■□□□□ 0.39
FAM3A-209ENST00000421517 CTDSPL2Q05D32 466 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 CCDC178Q5BJE1 867 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 MORN1Q5T089 497 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 MFSD6Q6ZSS7 791 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 GPR142Q7Z601 462 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 CCAR1Q8IX12 1150 aaKnown RBP17.51■□□□□ 0.39
FAM3A-209ENST00000421517 ABRAQ8N0Z2 381 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 PRPF38AQ8NAV1 312 aaKnown RBP17.51■□□□□ 0.39
FAM3A-209ENST00000421517 NKX2-3Q8TAU0 364 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 GMCL1Q96IK5 515 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 PAGR1Q9BTK6 254 aa17.51■□□□□ 0.39
FAM3A-209ENST00000421517 SPATC1LQ9H0A9 340 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms