RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 COG2Q14746 738 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 CCL14Q16627 93 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 C12orf60Q5U649 245 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 LPAR1Q92633 364 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 DYNLL2Q96FJ2 89 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 CCDC17Q96LX7 622 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 SH2D4AQ9H788 454 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 HOXC10Q9NYD6 342 aa20.91■□□□□ 0.94
MSH6-203ENST00000420813 HOXC6P09630 235 aa20.9■□□□□ 0.94
MSH6-203ENST00000420813 GRB14Q14449 540 aa20.9■□□□□ 0.94
MSH6-203ENST00000420813 ARHGEF10LQ9HCE6 1279 aa20.9■□□□□ 0.94
MSH6-203ENST00000420813 ECHDC1Q9NTX5 307 aa20.9■□□□□ 0.94
MSH6-203ENST00000420813 IVNS1ABPQ9Y6Y0 642 aa20.9■□□□□ 0.94
MSH6-203ENST00000420813 GREB1LQ9C091 1923 aaPredicted RBP20.9■□□□□ 0.94
MSH6-203ENST00000420813 ZNFX1Q9P2E3 1918 aaKnown RBP20.9■□□□□ 0.94
MSH6-203ENST00000420813 COL11A1P12107 1806 aaPredicted RBP20.9■□□□□ 0.94
MSH6-203ENST00000420813 A0A1W2PPC1 479 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 USP17L12C9JPN9 530 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 USP17L21D6R901 530 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 SMARCA5O60264 1052 aaPredicted RBP20.89■□□□□ 0.93
MSH6-203ENST00000420813 AKR1B1P15121 316 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 WDR78Q5VTH9 848 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 C16orf86Q6ZW13 317 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 TANGO6Q9C0B7 1094 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 C11orf49Q9H6J7 331 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 TMX2Q9Y320 296 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 SLC4A4Q9Y6R1 1079 aa20.89■□□□□ 0.93
MSH6-203ENST00000420813 CHGBP05060 677 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 CCND3P30281 292 aaPredicted RBP20.88■□□□□ 0.93
MSH6-203ENST00000420813 CDK8P49336 464 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 ICA1Q05084 483 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 MFSD14CQ5VZR4 134 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 MB21D1Q8N884 522 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
MSH6-203ENST00000420813 DCTPP1Q9H773 170 aa20.88■□□□□ 0.93
MSH6-203ENST00000420813 LHX8Q68G74 356 aa20.87■□□□□ 0.93
MSH6-203ENST00000420813 SIAH1Q8IUQ4 282 aa20.87■□□□□ 0.93
MSH6-203ENST00000420813 SHCBP1Q8NEM2 672 aa20.87■□□□□ 0.93
MSH6-203ENST00000420813 GPATCH3Q96I76 525 aa20.87■□□□□ 0.93
MSH6-203ENST00000420813 VCPKMTQ9H867 229 aa20.87■□□□□ 0.93
MSH6-203ENST00000420813 ARPP21Q9UBL0 812 aaPredicted RBP20.87■□□□□ 0.93
MSH6-203ENST00000420813 CYP2D7A0A087X1C5 515 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 STRNO43815 780 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 KIAA1755Q5JYT7 1200 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 CTR9Q6PD62 1173 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 KBTBD3Q8NAB2 608 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 MOV10L1Q9BXT6 1211 aaKnown RBP20.86■□□□□ 0.93
MSH6-203ENST00000420813 SPATC1LQ9H0A9 340 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 FLRT1Q9NZU1 646 aa20.86■□□□□ 0.93
MSH6-203ENST00000420813 SMIM22K7EJ46 135 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 WDR46O15213 610 aaKnown RBP20.85■□□□□ 0.93
MSH6-203ENST00000420813 COL6A1P12109 1028 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 DSG3P32926 999 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 ATP2B2Q01814 1243 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 CLEC10AQ8IUN9 316 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 C7orf61Q8IZ16 206 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 KANSL2Q9H9L4 492 aa20.85■□□□□ 0.93
MSH6-203ENST00000420813 PFASO15067 1338 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 MSCO60682 206 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 SBK1Q52WX2 424 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 GIMAP6Q6P9H5 292 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 NPLOC4Q8TAT6 608 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 STRBPQ96SI9 672 aaKnown RBP20.84■□□□□ 0.93
MSH6-203ENST00000420813 MYH4Q9Y623 1939 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 SZT2Q5T011 3432 aa20.84■□□□□ 0.93
MSH6-203ENST00000420813 FLOT1O75955 427 aa20.83■□□□□ 0.93
MSH6-203ENST00000420813 IGHA2P01877 340 aa20.83■□□□□ 0.93
MSH6-203ENST00000420813 SPICE1Q8N0Z3 855 aa20.83■□□□□ 0.93
MSH6-203ENST00000420813 APPBP2Q92624 585 aa20.83■□□□□ 0.93
MSH6-203ENST00000420813 MROH8Q9H579 483 aa20.83■□□□□ 0.93
MSH6-203ENST00000420813 PLXNA1Q9UIW2 1896 aa20.83■□□□□ 0.92
MSH6-203ENST00000420813 ZFYP08048 801 aaPredicted RBP20.82■□□□□ 0.92
MSH6-203ENST00000420813 EEF2P13639 858 aaKnown RBP20.82■□□□□ 0.92
MSH6-203ENST00000420813 ERCC3P19447 782 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 ADORA2AP29274 412 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 BMP8BP34820 402 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 OLFML2BQ68BL8 750 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 DPP9Q86TI2 863 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 ABRAQ8N0Z2 381 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 ATG4CQ96DT6 458 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 GDF15Q99988 308 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 STAP2Q9UGK3 403 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 DDX20Q9UHI6 824 aaKnown RBP20.82■□□□□ 0.92
MSH6-203ENST00000420813 ROBO3Q96MS0 1386 aa20.82■□□□□ 0.92
MSH6-203ENST00000420813 GSG1L2A8MUP6 293 aa20.81■□□□□ 0.92
MSH6-203ENST00000420813 GOPCQ9HD26 462 aa20.81■□□□□ 0.92
MSH6-203ENST00000420813 SLC5A4Q9NY91 659 aa20.81■□□□□ 0.92
MSH6-203ENST00000420813 ADAMTS5Q9UNA0 930 aa20.81■□□□□ 0.92
MSH6-203ENST00000420813 RNF113AO15541 343 aaKnown RBP20.8■□□□□ 0.92
MSH6-203ENST00000420813 CYP2C19P33261 490 aa20.8■□□□□ 0.92
MSH6-203ENST00000420813 OSBP2Q969R2 916 aa20.8■□□□□ 0.92
MSH6-203ENST00000420813 ZMYND8Q9ULU4 1186 aaPredicted RBP20.8■□□□□ 0.92
MSH6-203ENST00000420813 TTC41PQ6P2S7 1318 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 SLC25A27O95847 323 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 CYBAP13498 195 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 GNAT2P19087 354 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 PLS1Q14651 629 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 LRRFIP1Q32MZ4 808 aaKnown RBP20.79■□□□□ 0.92
MSH6-203ENST00000420813 NCAPG2Q86XI2 1143 aa20.79■□□□□ 0.92
MSH6-203ENST00000420813 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms