RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 ANAPC4Q9UJX5 808 aa21.62■■□□□ 1.05
ECHDC3-202ENST00000420401 NR2E3Q9Y5X4 410 aa21.62■■□□□ 1.05
ECHDC3-202ENST00000420401 MYPNQ86TC9 1320 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 PRDM1O75626 825 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 GJB1P08034 283 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 CCL5P13501 91 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 CTGFP29279 349 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 GJA8P48165 433 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 PPP4R2Q9NY27 417 aa21.61■■□□□ 1.05
ECHDC3-202ENST00000420401 RAD50Q92878 1312 aa21.6■■□□□ 1.05
ECHDC3-202ENST00000420401 ADGRA2Q96PE1 1338 aa21.6■■□□□ 1.05
ECHDC3-202ENST00000420401 CHMLP26374 656 aa21.6■■□□□ 1.05
ECHDC3-202ENST00000420401 IRX3P78415 501 aaPredicted RBP21.6■■□□□ 1.05
ECHDC3-202ENST00000420401 PTPRFP10586 1907 aa21.6■■□□□ 1.05
ECHDC3-202ENST00000420401 A0A1W2PRG0 241 aa21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 GCLCP48506 637 aaPredicted RBP21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 ATP2B2Q01814 1243 aa21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 CTDSPL2Q05D32 466 aa21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 SIAH1Q8IUQ4 282 aa21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 ASCC2Q9H1I8 757 aaPredicted RBP21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 LOC285556D6RIA3 1793 aa21.59■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L15C9J2P7 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L13C9JLJ4 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L11C9JVI0 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L18D6R9N7 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L22D6RA61 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L17D6RBQ6 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L19D6RCP7 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L20D6RJB6 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 TSPY3P0CV98 308 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 TSPY8P0CW00 308 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 BCRP11274 1271 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 EEF2P13639 858 aaKnown RBP21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 USP17L24Q0WX57 530 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 SLC17A8Q8NDX2 589 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 DSCC1Q9BVC3 393 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 CTNNA3Q9UI47 895 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 TMX2Q9Y320 296 aa21.58■■□□□ 1.05
ECHDC3-202ENST00000420401 MYH8P13535 1937 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 VCAM1P19320 739 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 FCGRTP55899 365 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 TFAP4Q01664 338 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 BMP2KLQ5H9B9 411 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 SKAP1Q86WV1 359 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 CLEC10AQ8IUN9 316 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 NEDD1Q8NHV4 660 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 LPAR1Q92633 364 aa21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.57■■□□□ 1.04
ECHDC3-202ENST00000420401 ZNF213O14771 459 aa21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 PPP4R3BQ5MIZ7 849 aa21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 GTF3C2Q8WUA4 911 aaPredicted RBP21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 P2RX7Q99572 595 aaKnown RBP21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 GOPCQ9HD26 462 aa21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 NYAP2Q9P242 653 aa21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 RANBP2P49792 3224 aaKnown RBP21.56■■□□□ 1.04
ECHDC3-202ENST00000420401 DLL1O00548 723 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 ORC4O43929 436 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 RANBP6O60518 1105 aaKnown RBP21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 FARP2O94887 1054 aaPredicted RBP21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 FGRP09769 529 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 HAND2P61296 217 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 PRKCZQ05513 592 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 FAM47AQ5JRC9 791 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 CATSPERGQ6ZRH7 1159 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 UBE2Q1Q7Z7E8 422 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 ANKRD13CQ8N6S4 541 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 SLAIN1Q8ND83 568 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 U2AF1L4Q8WU68 220 aaKnown RBP21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 RPAP3Q9H6T3 665 aaPredicted RBP21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 VCPKMTQ9H867 229 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 TOMM22Q9NS69 142 aa21.55■■□□□ 1.04
ECHDC3-202ENST00000420401 IGKV6D-41A0A0C4DH26 115 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 TSPY2A6NKD2 308 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 HERVK_113P62684 666 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 FAM110CQ1W6H9 321 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 MFSD6Q6ZSS7 791 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 INCENPQ9NQS7 918 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 MTMR4Q9NYA4 1195 aa21.54■■□□□ 1.04
ECHDC3-202ENST00000420401 PLIN4Q96Q06 1357 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 SGSM2O43147 1006 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 EVI5O60447 810 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 TTLL1O95922 423 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 IMMTQ16891 758 aaKnown RBP21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 AKNAD1Q5T1N1 836 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 CEP95Q96GE4 821 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 UNC93B1Q9H1C4 597 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 IL25Q9H293 177 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 CLIP2Q9UDT6 1046 aa21.53■■□□□ 1.04
ECHDC3-202ENST00000420401 WDR46O15213 610 aaKnown RBP21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 RAD21O60216 631 aa21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 SGPL1O95470 568 aa21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 TFRCP02786 760 aaKnown RBP21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 NT5C2P49902 561 aa21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 RRP12Q5JTH9 1297 aaKnown RBP21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 SPICE1Q8N0Z3 855 aa21.52■■□□□ 1.04
ECHDC3-202ENST00000420401 STAG1Q8WVM7 1258 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms