RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 MAP3K11Q16584 847 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 DACT2Q5SW24 774 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 STRIP1Q5VSL9 837 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 APOBEC3HQ6NTF7 200 aaKnown RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 CDC42EP5Q6NZY7 148 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 NOSTRINQ8IVI9 506 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PNMA1Q8ND90 353 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 TEKT1Q969V4 418 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PPP1R9BQ96SB3 815 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 TNMDQ9H2S6 317 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 FOXP1Q9H334 677 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 KAT14Q9H8E8 782 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 VPS54Q9P1Q0 977 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 PCDHAC2Q9Y5I4 1007 aa9.39□□□□□ -0.91
COL12A1-204ENST00000419671 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
COL12A1-204ENST00000419671 COL4A5P29400 1685 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 A0A1W2PQ27 194 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 A0A1W2PQ64 194 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 A0A1W2PQD8 194 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 C21orf2O43822 256 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 KCNA3P22001 575 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 CRKP46108 304 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 TOB1P50616 345 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-204ENST00000419671 FKBP1AP62942 108 aaKnown RBP9.38□□□□□ -0.91
COL12A1-204ENST00000419671 KIAA2012Q0VF49 1180 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 GNL2Q13823 731 aaKnown RBP9.38□□□□□ -0.91
COL12A1-204ENST00000419671 SLC39A14Q15043 492 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 AXDND1Q5T1B0 1012 aaPredicted RBP9.38□□□□□ -0.91
COL12A1-204ENST00000419671 KIAA0825Q8IV33 1275 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 CKAP2LQ8IYA6 745 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 CNPY4Q8N129 248 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 ZDHHC15Q96MV8 337 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 PHF20Q9BVI0 1012 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 ZNF287Q9HBT7 754 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 USP40Q9NVE5 1235 aa9.38□□□□□ -0.91
COL12A1-204ENST00000419671 ARFGEF1Q9Y6D6 1849 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 ZMYND10O75800 440 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 VEGFAP15692 232 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 NOVP48745 357 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 AKAP17AQ02040 695 aaKnown RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 FAM160A1Q05DH4 1040 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 CCDC173Q0VFZ6 552 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 NPY5RQ15761 445 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 FMR1NBQ8N0W7 255 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 STAG2Q8N3U4 1231 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 FSIP1Q8NA03 581 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 TMEM47Q9BQJ4 181 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 MAD2L2Q9UI95 211 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 PRDM4Q9UKN5 801 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 STX8Q9UNK0 236 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 PLIN4Q96Q06 1357 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 A0A1B0GVL5 298 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 YDJCA8MPS7 323 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 PPP6R2O75170 966 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 CCDC192P0DO97 292 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 MARCKSP29966 332 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 NDUFA8P51970 172 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 NFIAQ12857 509 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 GRM4Q14833 912 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 SAFBQ15424 915 aaKnown RBP eCLIP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 SLC35G1Q2M3R5 365 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 RASGRP2Q7LDG7 609 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 MRPS27Q92552 414 aaKnown RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 PDLIM2Q96JY6 352 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 MRIQ9BWK5 157 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 OSBPL5Q9H0X9 879 aaPredicted RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.37□□□□□ -0.91
COL12A1-204ENST00000419671 MRVI1Q9Y6F6 885 aa9.37□□□□□ -0.91
COL12A1-204ENST00000419671 KIF5BP33176 963 aa9.36□□□□□ -0.91
COL12A1-204ENST00000419671 TYRO3Q06418 890 aa9.36□□□□□ -0.91
COL12A1-204ENST00000419671 PFKFB3Q16875 520 aaPredicted RBP9.36□□□□□ -0.91
COL12A1-204ENST00000419671 EARS2Q5JPH6 523 aaKnown RBP9.36□□□□□ -0.91
COL12A1-204ENST00000419671 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
COL12A1-204ENST00000419671 CCDC73Q6ZRK6 1079 aa9.36□□□□□ -0.91
COL12A1-204ENST00000419671 SLC16A10Q8TF71 515 aa9.36□□□□□ -0.91
COL12A1-204ENST00000419671 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 FAM205CA6NFA0 338 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 ADAMTS3O15072 1205 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 CYTH3O43739 400 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SCG2P13521 617 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 XBP1P17861 261 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 HDLBPQ00341 1268 aaKnown RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 RILPL1Q5EBL4 403 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 ZFPM1Q8IX07 1006 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 TTLL6Q8N841 843 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 ANP32BQ92688 251 aaKnown RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 TNFRSF25Q93038 417 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SERPINB13Q9UIV8 391 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 PPIP5K2O43314 1243 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 KINO60870 393 aaKnown RBP9.35□□□□□ -0.91
COL12A1-204ENST00000419671 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 DPEP1P16444 411 aa9.35□□□□□ -0.91
COL12A1-204ENST00000419671 CMA1P23946 247 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms