RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 SRGNP10124 158 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 NOVP48745 357 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 FKBP1AP62942 108 aaKnown RBP16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 DIXDC1Q155Q3 683 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MLKLQ8NB16 471 aa16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
HLA-DPA1-242ENST00000419277 C6orf229H3BNL8 230 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CYP2D6P10635 497 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 NLRP5P59047 1200 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ATP2C1P98194 919 aaPredicted RBP16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 POSTNQ15063 836 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 FAM47AQ5JRC9 791 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TTC38Q5R3I4 469 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MASTLQ96GX5 879 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 POLLQ9UGP5 575 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SWAP70Q9UH65 585 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PCDHB6Q9Y5E3 794 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 RASA1P20936 1047 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 RHBDL3P58872 404 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 NPY5RQ15761 445 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 METTL16Q86W50 562 aaKnown RBP16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CCDC150Q8NCX0 1101 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ZC3H12CQ9C0D7 883 aaKnown RBP16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 OSBPL5Q9H0X9 879 aaPredicted RBP16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 IL17RBQ9NRM6 502 aa16.62■□□□□ 0.25
HLA-DPA1-242ENST00000419277 UBE2Q2LH0YL09 131 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TOP1P11387 765 aaKnown RBP16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 KCNJ6P48051 423 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CCDC186Q7Z3E2 898 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SPC24Q8NBT2 197 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SPATA20Q8TB22 786 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 OXER1Q8TDS5 423 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MRIQ9BWK5 157 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PARP3Q9Y6F1 533 aa16.61■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PALM3A6NDB9 673 aaPredicted RBP16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 LONRF3Q496Y0 759 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 HHIPL2Q6UWX4 724 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MPNDQ8N594 471 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SMARCE1Q969G3 411 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CLIC6Q96NY7 704 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 KCNF1Q9H3M0 494 aa16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 GREB1LQ9C091 1923 aaPredicted RBP16.6■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SMIM22K7EJ46 135 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 NMT2O60551 498 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 TXLNAP40222 546 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 CDK8P49336 464 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MDM2Q00987 491 aaPredicted RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PODNQ7Z5L7 613 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PROM2Q8N271 834 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 KCND1Q9NSA2 647 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 BARHL2Q9NY43 387 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MAD2L2Q9UI95 211 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 JAG2Q9Y219 1238 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ESYT2A0FGR8 921 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 POLR2DO15514 142 aaKnown RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MYL1P05976 194 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 PTGS1P23219 599 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 LONP1P36776 959 aaKnown RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 SARSP49591 514 aaKnown RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 HDLBPQ00341 1268 aaKnown RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 DPP8Q6V1X1 898 aaPredicted RBP16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 GSDMAQ96QA5 445 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 STX8Q9UNK0 236 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 DAGLAQ9Y4D2 1042 aa16.59■□□□□ 0.25
HLA-DPA1-242ENST00000419277 ACTN4O43707 911 aaKnown RBP16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PARP1P09874 1014 aaKnown RBP16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GNA11P29992 359 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 NCAPHQ15003 741 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GRIPAP1Q4V328 841 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TMEM47Q9BQJ4 181 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CSRNP2Q9H175 543 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PCDHA5Q9Y5H7 936 aa16.58■□□□□ 0.24
HLA-DPA1-242ENST00000419277 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PRPHP41219 470 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PLCD1P51178 756 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PNOCQ13519 176 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ASPRV1Q53RT3 343 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 DNTTIP2Q5QJE6 756 aaKnown RBP16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 STYK1Q6J9G0 422 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 LRRC8AQ8IWT6 810 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 IQUBQ8NA54 791 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SHISA4Q96DD7 197 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GTPBP4Q9BZE4 634 aaKnown RBP16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 EHD4Q9H223 541 aa16.57■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CCDC194A0A1B0GVG4 234 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GABPAQ06546 454 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 MORC3Q14149 939 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GRIK5Q16478 980 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CC2D2BQ6DHV5 1058 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 KRT25Q7Z3Z0 450 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CCDC112Q8NEF3 446 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ENOX1Q8TC92 643 aaKnown RBP16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 DYNLL2Q96FJ2 89 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms