RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 SPZ1Q9BXG8 430 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 VPS54Q9P1Q0 977 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 HDAC9Q9UKV0 1011 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 CEP131Q9UPN4 1083 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 ADAMTSL1Q8N6G6 1762 aa19.33■□□□□ 0.69
SSBP3-205ENST00000417664 ZBTB7AO95365 584 aa19.33■□□□□ 0.68
SSBP3-205ENST00000417664 CMA1P23946 247 aa19.33■□□□□ 0.68
SSBP3-205ENST00000417664 UVSSAQ2YD98 709 aa19.33■□□□□ 0.68
SSBP3-205ENST00000417664 DALRD3Q5D0E6 543 aaKnown RBP19.33■□□□□ 0.68
SSBP3-205ENST00000417664 FOXP4Q8IVH2 680 aaPredicted RBP19.33■□□□□ 0.68
SSBP3-205ENST00000417664 FSIP1Q8NA03 581 aa19.33■□□□□ 0.68
SSBP3-205ENST00000417664 PANK2Q9BZ23 570 aa19.33■□□□□ 0.68
SSBP3-205ENST00000417664 MYH8P13535 1937 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 KINO60870 393 aaKnown RBP19.32■□□□□ 0.68
SSBP3-205ENST00000417664 PARP1P09874 1014 aaKnown RBP19.32■□□□□ 0.68
SSBP3-205ENST00000417664 SHMT1P34896 483 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 MMP14P50281 582 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 SNW1Q13573 536 aaKnown RBP19.32■□□□□ 0.68
SSBP3-205ENST00000417664 CFAP100Q494V2 611 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 GALNT17Q6IS24 598 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 FAM198AQ9UFP1 575 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 ZNRF3Q9ULT6 936 aa19.32■□□□□ 0.68
SSBP3-205ENST00000417664 ATRNL1Q5VV63 1379 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 TTLL1O95922 423 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 BMP15O95972 392 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 AXDND1Q5T1B0 1012 aaPredicted RBP19.31■□□□□ 0.68
SSBP3-205ENST00000417664 METTL16Q86W50 562 aaKnown RBP19.31■□□□□ 0.68
SSBP3-205ENST00000417664 NIM1KQ8IY84 436 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 STAG2Q8N3U4 1231 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 OGFOD1Q8N543 542 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 GMLQ99445 158 aa19.31■□□□□ 0.68
SSBP3-205ENST00000417664 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
SSBP3-205ENST00000417664 AKR1B1P15121 316 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 CCDC173Q0VFZ6 552 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 NR5A1Q13285 461 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 AGBL3Q8NEM8 1001 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 CCDC148Q8NFR7 591 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 GOLPH3LQ9H4A5 285 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 TMOD2Q9NZR1 351 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 NOL7Q9UMY1 257 aaKnown RBP19.3■□□□□ 0.68
SSBP3-205ENST00000417664 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 KLRF2D3W0D1 207 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 PSMD14O00487 310 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 CUTAO60888 179 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 CAVIN2O95810 425 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 TRAPPC10P48553 1259 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 TOB1P50616 345 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-205ENST00000417664 NLRP5P59047 1200 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 ASPRV1Q53RT3 343 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 FMR1NBQ8N0W7 255 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-205ENST00000417664 SHISA4Q96DD7 197 aa19.3■□□□□ 0.68
SSBP3-205ENST00000417664 ATF5Q9Y2D1 282 aaPredicted RBP19.3■□□□□ 0.68
SSBP3-205ENST00000417664 FAM237AA0A1B0GTK4 181 aa19.29■□□□□ 0.68
SSBP3-205ENST00000417664 hCG_1642624A0A1W2PR95 340 aa19.29■□□□□ 0.68
SSBP3-205ENST00000417664 CAMK4Q16566 473 aa19.29■□□□□ 0.68
SSBP3-205ENST00000417664 OXER1Q8TDS5 423 aa19.29■□□□□ 0.68
SSBP3-205ENST00000417664 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
SSBP3-205ENST00000417664 SPDYE2BA6NHP3 402 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 SPDYE6P0CI01 402 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 SNHG28P0DPA3 235 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 NPY5RQ15761 445 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 KRI1Q8N9T8 703 aaKnown RBP19.28■□□□□ 0.68
SSBP3-205ENST00000417664 MTMR14Q8NCE2 650 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
SSBP3-205ENST00000417664 TNFRSF25Q93038 417 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 CABP5Q9NP86 173 aa19.28■□□□□ 0.68
SSBP3-205ENST00000417664 GREB1LQ9C091 1923 aaPredicted RBP19.28■□□□□ 0.68
SSBP3-205ENST00000417664 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 hCG_1984214I3L0E3 225 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 PDHBP11177 359 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 TCP10Q12799 353 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 FKBP1CQ5VVH2 108 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 TATDN1Q6P1N9 297 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 SASS6Q6UVJ0 657 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 ZSCAN29Q8IWY8 852 aaPredicted RBP19.27■□□□□ 0.68
SSBP3-205ENST00000417664 ZFPM1Q8IX07 1006 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 ZNF713Q8N859 430 aaPredicted RBP19.27■□□□□ 0.68
SSBP3-205ENST00000417664 DAGLBQ8NCG7 672 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 PRMT6Q96LA8 375 aaPredicted RBP19.27■□□□□ 0.68
SSBP3-205ENST00000417664 TIGD1Q96MW7 591 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 PPP1R9BQ96SB3 815 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 TAOK3Q9H2K8 898 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 TDRD3Q9H7E2 651 aaKnown RBP19.27■□□□□ 0.68
SSBP3-205ENST00000417664 BARHL2Q9NY43 387 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 PCDHAC2Q9Y5I4 1007 aa19.27■□□□□ 0.68
SSBP3-205ENST00000417664 DDTLA6NHG4 134 aaPredicted RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 CYTH3O43739 400 aa19.27■□□□□ 0.67
SSBP3-205ENST00000417664 RAD17O75943 681 aa19.27■□□□□ 0.67
SSBP3-205ENST00000417664 MARCKSP29966 332 aaPredicted RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 TYRO3Q06418 890 aa19.27■□□□□ 0.67
SSBP3-205ENST00000417664 DLGAP5Q15398 846 aa19.27■□□□□ 0.67
SSBP3-205ENST00000417664 CERKLQ49MI3 558 aaPredicted RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 RRP36Q96EU6 259 aaKnown RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 BRCA1P38398 1863 aaKnown RBP19.27■□□□□ 0.67
SSBP3-205ENST00000417664 A0A1B0GVL5 298 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 PTPREP23469 700 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 NDUFA8P51970 172 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 CACNB3P54284 484 aa19.26■□□□□ 0.67
SSBP3-205ENST00000417664 SH3BP5LQ7L8J4 393 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms