RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 USP17L15C9J2P7 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L13C9JLJ4 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L11C9JVI0 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L18D6R9N7 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L22D6RA61 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L17D6RBQ6 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L19D6RCP7 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L20D6RJB6 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 GH2P01242 217 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 USP17L24Q0WX57 530 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 CATSPERGQ6ZRH7 1159 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 AACSQ86V21 672 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 ARRDC4Q8NCT1 418 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 GPR108Q9NPR9 543 aa21.81■■□□□ 1.08
VCP-202ENST00000417448 DBNLQ9UJU6 430 aaKnown RBP21.81■■□□□ 1.08
VCP-202ENST00000417448 CHD9Q3L8U1 2897 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 KBTBD13C9JR72 458 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 HSP90AB4PQ58FF6 505 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 LBX2Q6XYB7 198 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 ERC1Q8IUD2 1116 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 FERMT2Q96AC1 680 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 RNPC3Q96LT9 517 aaKnown RBP21.8■■□□□ 1.08
VCP-202ENST00000417448 TRIM34Q9BYJ4 488 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 DCTPP1Q9H773 170 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 SNRKQ9NRH2 765 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 LRP2BPQ9P2M1 347 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 SAP30BPQ9UHR5 308 aaKnown RBP21.8■■□□□ 1.08
VCP-202ENST00000417448 IVNS1ABPQ9Y6Y0 642 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 SMCHD1A6NHR9 2005 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 A0A0G2JMZ2 1700 aa21.8■■□□□ 1.08
VCP-202ENST00000417448 VCAM1P19320 739 aa21.79■■□□□ 1.08
VCP-202ENST00000417448 ADCYAP1R1P41586 468 aa21.79■■□□□ 1.08
VCP-202ENST00000417448 PPP4CP60510 307 aa21.79■■□□□ 1.08
VCP-202ENST00000417448 KIF1BPQ96EK5 621 aa21.79■■□□□ 1.08
VCP-202ENST00000417448 NOL10Q9BSC4 688 aaKnown RBP21.79■■□□□ 1.08
VCP-202ENST00000417448 SPDYE16A6NNV3 312 aaPredicted RBP21.78■■□□□ 1.08
VCP-202ENST00000417448 RAB11FIP3O75154 756 aa21.78■■□□□ 1.08
VCP-202ENST00000417448 MYCNP04198 464 aaPredicted RBP21.78■■□□□ 1.08
VCP-202ENST00000417448 C1orf53Q5VUE5 145 aa21.78■■□□□ 1.08
VCP-202ENST00000417448 NAA16Q6N069 864 aaPredicted RBP21.78■■□□□ 1.08
VCP-202ENST00000417448 FEZ1Q99689 392 aa21.78■■□□□ 1.08
VCP-202ENST00000417448 SEPT4O43236 478 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 BAG3O95817 575 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 TLE2Q04725 743 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 LRRC41Q15345 812 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 TTC39AQ5SRH9 613 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 OLFML2BQ68BL8 750 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 ACER1Q8TDN7 264 aa21.77■■□□□ 1.08
VCP-202ENST00000417448 IGHDP01880 384 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 PLCG2P16885 1265 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 DNAJB2P25686 324 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 ADORA2AP29274 412 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 MYO9BQ13459 2157 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 FAM47AQ5JRC9 791 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 PRAMEF19Q5SWL8 479 aa21.76■■□□□ 1.07
VCP-202ENST00000417448 REV3LO60673 3130 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 ZNFX1Q9P2E3 1918 aaKnown RBP21.75■■□□□ 1.07
VCP-202ENST00000417448 TATDN1Q6P1N9 297 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 DPP9Q86TI2 863 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 CLASRPQ8N2M8 674 aaKnown RBP21.75■■□□□ 1.07
VCP-202ENST00000417448 LRRCC1Q9C099 1032 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 KIAA1683Q9H0B3 1180 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 PLXNA1Q9UIW2 1896 aa21.75■■□□□ 1.07
VCP-202ENST00000417448 COBLO75128 1261 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 HLA-DOAP06340 250 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 PLA2G5P39877 138 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 DYNLL1P63167 89 aaKnown RBP21.74■■□□□ 1.07
VCP-202ENST00000417448 CCDC158Q5M9N0 1113 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 MOV10L1Q9BXT6 1211 aaKnown RBP21.74■■□□□ 1.07
VCP-202ENST00000417448 ZNF576Q9H609 170 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 RPAP3Q9H6T3 665 aaPredicted RBP21.74■■□□□ 1.07
VCP-202ENST00000417448 XIRP2A4UGR9 3374 aa21.74■■□□□ 1.07
VCP-202ENST00000417448 CLTBP09497 229 aa21.73■■□□□ 1.07
VCP-202ENST00000417448 IFIT2P09913 472 aaKnown RBP21.73■■□□□ 1.07
VCP-202ENST00000417448 USP14P54578 494 aa21.73■■□□□ 1.07
VCP-202ENST00000417448 RAB3GAP1Q15042 981 aa21.73■■□□□ 1.07
VCP-202ENST00000417448 PHF24Q9UPV7 400 aa21.73■■□□□ 1.07
VCP-202ENST00000417448 TACC3Q9Y6A5 838 aa21.73■■□□□ 1.07
VCP-202ENST00000417448 KIAA0355O15063 1070 aa21.72■■□□□ 1.07
VCP-202ENST00000417448 PARP14Q460N5 1801 aa21.71■■□□□ 1.07
VCP-202ENST00000417448 CHD7Q9P2D1 2997 aa21.71■■□□□ 1.07
VCP-202ENST00000417448 CYP2E1P05181 493 aaPredicted RBP21.71■■□□□ 1.07
VCP-202ENST00000417448 UQCRFS1P1P0C7P4 283 aa21.71■■□□□ 1.07
VCP-202ENST00000417448 ZAP70P43403 619 aa21.71■■□□□ 1.07
VCP-202ENST00000417448 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.7■■□□□ 1.06
VCP-202ENST00000417448 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.7■■□□□ 1.06
VCP-202ENST00000417448 RAG1P15918 1043 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 ERCC3P19447 782 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 FPGSQ05932 587 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 HDAC1Q13547 482 aaPredicted RBP21.7■■□□□ 1.06
VCP-202ENST00000417448 TSHZ3Q63HK5 1081 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 B4GALNT3Q6L9W6 998 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 OTUD7AQ8TE49 926 aaPredicted RBP21.7■■□□□ 1.06
VCP-202ENST00000417448 PPM1EQ8WY54 764 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 TIFAQ96CG3 184 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 SPATC1LQ9H0A9 340 aa21.7■■□□□ 1.06
VCP-202ENST00000417448 STRNO43815 780 aa21.69■■□□□ 1.06
VCP-202ENST00000417448 PQBP1O60828 265 aaKnown RBP21.69■■□□□ 1.06
VCP-202ENST00000417448 GUCY1A2P33402 732 aa21.69■■□□□ 1.06
VCP-202ENST00000417448 ABCB5Q2M3G0 1257 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms