RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 N4BP3O15049 544 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 ZNF185O15231 689 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 NEBLO76041 1014 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 ELF1P32519 619 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 PLCD1P51178 756 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 PI16Q6UXB8 463 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 TMTC1Q8IUR5 882 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 CHP1Q99653 195 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 N4BP2Q86UW6 1770 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 GRIN2DO15399 1336 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 SYNRGQ9UMZ2 1314 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 KRT9P35527 623 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 MDM2Q00987 491 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 C2orf54Q08AI8 447 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 MORC3Q14149 939 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 DDB1Q16531 1140 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 HLFQ16534 295 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 LRCH2Q5VUJ6 765 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 ZKSCAN4Q969J2 545 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 CWC25Q9NXE8 425 aaPredicted RBP16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 ZBTB1Q9Y2K1 713 aa16.54■□□□□ 0.24
NCKIPSD-204ENST00000416649 M0R2C6 588 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 KCNQ2O43526 872 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 IMMTQ16891 758 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 SH2D3CQ8N5H7 860 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 MAP3K14Q99558 947 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 LAMA4Q16363 1823 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 PTPN12Q05209 780 aaKnown RBP16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 CCDC122Q5T0U0 273 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 CYP26C1Q6V0L0 522 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 USP49Q70CQ1 688 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 ODF2LQ9ULJ1 636 aa16.53■□□□□ 0.24
NCKIPSD-204ENST00000416649 CCNI2Q6ZMN8 369 aaPredicted RBP16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 B4GALNT4Q76KP1 1039 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 AIDAQ96BJ3 306 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 NGLY1Q96IV0 654 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 VEZTQ9HBM0 779 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 ABHD10Q9NUJ1 306 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 TRAPPC11Q7Z392 1133 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 KIRREL3Q8IZU9 778 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 JAKMIP2Q96AA8 810 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 ARL8AQ96BM9 186 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 MYL10Q9BUA6 226 aa16.52■□□□□ 0.24
NCKIPSD-204ENST00000416649 CHUKO15111 745 aa16.52■□□□□ 0.23
NCKIPSD-204ENST00000416649 STAMQ92783 540 aa16.52■□□□□ 0.23
NCKIPSD-204ENST00000416649 PUS3Q9BZE2 481 aaKnown RBP16.52■□□□□ 0.23
NCKIPSD-204ENST00000416649 INCENPQ9NQS7 918 aa16.52■□□□□ 0.23
NCKIPSD-204ENST00000416649 MEFVO15553 781 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 CD44P16070 742 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 PAX7P23759 505 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 LRRC24Q50LG9 513 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 SPATA1Q5VX52 437 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 TAB2Q9NYJ8 693 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 MYH8P13535 1937 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 ZMYM6O95789 1325 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 CCDC189A1A4V9 331 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 STARD3NLO95772 234 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 CDR1P51861 262 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 SLC7A5Q01650 507 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 EZH2Q15910 746 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 APTXQ7Z2E3 356 aaKnown RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 KIAA1328Q86T90 577 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 MYO1AQ9UBC5 1043 aa16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 EPN1Q9Y6I3 576 aaPredicted RBP16.51■□□□□ 0.23
NCKIPSD-204ENST00000416649 ANTXR2P58335 489 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 MIEF2Q96C03 454 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 IFIT1P09914 478 aaKnown RBP16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 FNTAP49354 379 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 CEP85LQ5SZL2 805 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 CCDC70Q6NSX1 233 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 NFXL1Q6ZNB6 911 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 HDAC7Q8WUI4 952 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 COPRSQ9NQ92 184 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 KLC4Q9NSK0 619 aa16.5■□□□□ 0.23
NCKIPSD-204ENST00000416649 BTBD18B2RXH4 712 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 TOM1O60784 492 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 FGAP02671 866 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 KIF6Q6ZMV9 814 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 NKX2-3Q8TAU0 364 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 CTAGE1Q96RT6 745 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 CTNND2Q9UQB3 1225 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 UTYO14607 1347 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 ABCA3Q99758 1704 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 PALLDQ8WX93 1383 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 ADAMTS7Q9UKP4 1686 aa16.49■□□□□ 0.23
NCKIPSD-204ENST00000416649 PDE2AO00408 941 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms