RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 IFNAR1P17181 557 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 FOSBP53539 338 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 ICA1Q05084 483 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 PKP1Q13835 747 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 GRM4Q14833 912 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 MIGA2Q7L4E1 593 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 TNPO1Q92973 898 aaKnown RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 L3MBTL3Q96JM7 780 aaPredicted RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 LZTS2Q9BRK4 669 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 RBM27Q9P2N5 1060 aaKnown RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 ISY1Q9ULR0 285 aaKnown RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 FARP1Q9Y4F1 1045 aaPredicted RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 ASTN2O75129 1339 aaPredicted RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 PITPNM2Q9BZ72 1349 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 GOLGB1Q14789 3259 aaKnown RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 RAD21O60216 631 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 DTNBO60941 627 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 DEXIO95424 95 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 GH2P01242 217 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 SLURP2P0DP57 97 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 XBP1P17861 261 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 EPHX2P34913 555 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 SEPT2Q15019 361 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 TMTC3Q6ZXV5 915 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 USP50Q70EL3 339 aaPredicted RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 LRRC47Q8N1G4 583 aaKnown RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 CCDC82Q8N4S0 544 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 PHKBQ93100 1093 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 ALG1Q9BT22 464 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 RNF26Q9BY78 433 aaPredicted RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 ZNF341Q9BYN7 854 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 ARHGEF10LQ9HCE6 1279 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 NYAP2Q9P242 653 aa11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 SCAF8Q9UPN6 1271 aaKnown RBP11.8□□□□□ -0.52
DEPDC4-203ENST00000416321 ASNSP08243 561 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 EEF2P13639 858 aaKnown RBP11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 NOVP48745 357 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 NTRK3Q16288 839 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 CCDC96Q2M329 555 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 ASPRV1Q53RT3 343 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 SH2D4AQ9H788 454 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 FAM217BQ9NTX9 383 aaPredicted RBP11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 ZBTB21Q9ULJ3 1066 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 MTMR6Q9Y217 621 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 GREB1LQ9C091 1923 aaPredicted RBP11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 MYH4Q9Y623 1939 aa11.79□□□□□ -0.52
DEPDC4-203ENST00000416321 PLEKHA8P1O95397 391 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 F13A1P00488 732 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 FDPSP14324 419 aaKnown RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 CAP2P40123 477 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 HIRAP54198 1017 aaPredicted RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 SAFBQ15424 915 aaKnown RBP eCLIP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 EAPPQ56P03 285 aaPredicted RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 USP48Q86UV5 1035 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 CDAN1Q8IWY9 1227 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 CMTR1Q8N1G2 835 aaKnown RBP11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 GINM1Q9NU53 330 aa11.78□□□□□ -0.52
DEPDC4-203ENST00000416321 SCN4AP35499 1836 aa11.77□□□□□ -0.52
DEPDC4-203ENST00000416321 DDX11L8A8MPP1 907 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 PRPF3O43395 683 aaKnown RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 PTMSP20962 102 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 NF2P35240 595 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 GUCY1B3Q02153 619 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 MAP3K10Q02779 954 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 NFKBIBQ15653 356 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 GPATCH4Q5T3I0 446 aaKnown RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 CDC37L1Q7L3B6 337 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 PNMA8AQ86V59 439 aaPredicted RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 ZC3H15Q8WU90 426 aaKnown RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 DCAF4Q8WV16 495 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 GOPCQ9HD26 462 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 SEC63Q9UGP8 760 aaKnown RBP11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 SYNPO2Q9UMS6 1093 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 ZDHHC9Q9Y397 364 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 CNTNAP5Q8WYK1 1306 aa11.77□□□□□ -0.53
DEPDC4-203ENST00000416321 MYH6P13533 1939 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 PALM3A6NDB9 673 aaPredicted RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 KLRF2D3W0D1 207 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 CTNND1O60716 968 aaKnown RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 BAG4O95429 457 aaKnown RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 GOLGA8HP0CJ92 632 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 PDHBP11177 359 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 NCLP19338 710 aaKnown RBP11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 GUCY1A2P33402 732 aa11.76□□□□□ -0.53
DEPDC4-203ENST00000416321 SLC1A4P43007 532 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms