RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 ZNF213O14771 459 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 HAND2P61296 217 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 TFAP4Q01664 338 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 FAM110CQ1W6H9 321 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 OTOP1Q7RTM1 612 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 IL25Q9H293 177 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 RPAP3Q9H6T3 665 aaPredicted RBP21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 TOMM22Q9NS69 142 aa21.34■■□□□ 1.01
SEMA3B-201ENST00000416295 SGSM2O43147 1006 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 RANBP6O60518 1105 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 GNRH1P01148 92 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 HERVK_113P62684 666 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 IMMTQ16891 758 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 FAM47AQ5JRC9 791 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 AKNAD1Q5T1N1 836 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 CATSPERGQ6ZRH7 1159 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 MFSD6Q6ZSS7 791 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 ANKRD13CQ8N6S4 541 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 STAG1Q8WVM7 1258 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 P2RX7Q99572 595 aaKnown RBP21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 MTMR4Q9NYA4 1195 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 SYNPO2Q9UMS6 1093 aa21.33■■□□□ 1.01
SEMA3B-201ENST00000416295 WDR46O15213 610 aaKnown RBP21.32■■□□□ 1
SEMA3B-201ENST00000416295 TTLL1O95922 423 aa21.32■■□□□ 1
SEMA3B-201ENST00000416295 NT5C2P49902 561 aa21.32■■□□□ 1
SEMA3B-201ENST00000416295 PSMC4P43686 418 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
SEMA3B-201ENST00000416295 TBC1D10CQ8IV04 446 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 SPICE1Q8N0Z3 855 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 TANGO6Q9C0B7 1094 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 INCENPQ9NQS7 918 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 MORF4L1Q9UBU8 362 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 CLIP2Q9UDT6 1046 aa21.31■■□□□ 1
SEMA3B-201ENST00000416295 HOXD10P28358 340 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 FCGRTP55899 365 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 KIAA1755Q5JYT7 1200 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 MKL1Q969V6 931 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 ARHGAP39Q9C0H5 1083 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 NBPF3Q9H094 633 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 TACC3Q9Y6A5 838 aa21.3■■□□□ 1
SEMA3B-201ENST00000416295 RAD21O60216 631 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 FMNL1O95466 1100 aaPredicted RBP21.29■■□□□ 1
SEMA3B-201ENST00000416295 CAP1Q01518 475 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 CASC1Q6TDU7 716 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 LBX2Q6XYB7 198 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 KIAA1211Q6ZU35 1233 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 TRIM47Q96LD4 638 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 PTPN22Q9Y2R2 807 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 U3KPZ7 1027 aaPredicted RBP21.29■■□□□ 1
SEMA3B-201ENST00000416295 LAMA4Q16363 1823 aa21.29■■□□□ 1
SEMA3B-201ENST00000416295 PRMT2P55345 433 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 COG2Q14746 738 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 GPRC5AQ8NFJ5 357 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 ESR2Q92731 530 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 ESYT1Q9BSJ8 1104 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 HOXC10Q9NYD6 342 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 RABGAP1Q9Y3P9 1069 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 MYPNQ86TC9 1320 aa21.28■■□□□ 1
SEMA3B-201ENST00000416295 F5H6K3 240 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 FLOT1O75955 427 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 CTGFP29279 349 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 PTH1RQ03431 593 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 KLRC3Q07444 240 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 GMCL1P1Q8NEA9 526 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 PAGR1Q9BTK6 254 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 IL17RBQ9NRM6 502 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 TCP11L1Q9NUJ3 509 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 RBPJLQ9UBG7 517 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 STX8Q9UNK0 236 aa21.27■■□□□ 1
SEMA3B-201ENST00000416295 NEDD4P46934 1319 aa21.27■□□□□ 0.99
SEMA3B-201ENST00000416295 PDE4DIPQ5VU43 2346 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 SPDYE16A6NNV3 312 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 TNPO2O14787 897 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 CDC45O75419 566 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 ECM2O94769 699 aaPredicted RBP21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 NDUFB10O96000 172 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 ERVK-9P63128 1117 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 ERVK-24P63145 666 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 LRRC47Q8N1G4 583 aaKnown RBP21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 CNNM2Q9H8M5 875 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 TXNRD2Q9NNW7 524 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 SRRDQ9UH36 339 aa21.26■□□□□ 0.99
SEMA3B-201ENST00000416295 NMT2O60551 498 aa21.25■□□□□ 0.99
SEMA3B-201ENST00000416295 FAM83BQ5T0W9 1011 aa21.25■□□□□ 0.99
SEMA3B-201ENST00000416295 MB21D1Q8N884 522 aa21.25■□□□□ 0.99
SEMA3B-201ENST00000416295 COA7Q96BR5 231 aa21.25■□□□□ 0.99
SEMA3B-201ENST00000416295 KRT23Q9C075 422 aa21.25■□□□□ 0.99
SEMA3B-201ENST00000416295 DSG3P32926 999 aa21.24■□□□□ 0.99
SEMA3B-201ENST00000416295 NOVP48745 357 aa21.24■□□□□ 0.99
SEMA3B-201ENST00000416295 CCNA1P78396 465 aa21.24■□□□□ 0.99
SEMA3B-201ENST00000416295 CCAR1Q8IX12 1150 aaKnown RBP21.24■□□□□ 0.99
SEMA3B-201ENST00000416295 MAP4K1Q92918 833 aa21.24■□□□□ 0.99
SEMA3B-201ENST00000416295 ZSWIM8A7E2V4 1837 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 MAPK4P31152 587 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 CCDC178Q5BJE1 867 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 POTEEQ6S8J3 1075 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 IQCA1Q86XH1 822 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 TTC14Q96N46 770 aa21.23■□□□□ 0.99
SEMA3B-201ENST00000416295 PTCH2Q9Y6C5 1203 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms