RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 GH2P01242 217 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 HIRAP54198 1017 aaPredicted RBP16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 ICA1Q05084 483 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 SEPT2Q15019 361 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 CLEC17AQ6ZS10 378 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 TMTC3Q6ZXV5 915 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 CCDC82Q8N4S0 544 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 ZC3H15Q8WU90 426 aaKnown RBP16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 PHKBQ93100 1093 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 TEPSINQ96N21 525 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
HMGA1P1-201ENST00000415560 PALM3A6NDB9 673 aaPredicted RBP16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 ASNSP08243 561 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 EEF2P13639 858 aaKnown RBP16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 EPHX2P34913 555 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 CAP2P40123 477 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 ASPRV1Q53RT3 343 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 NBPF11Q86T75 865 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 PNMA8AQ86V59 439 aaPredicted RBP16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 SULF1Q8IWU6 871 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 MAD2L2Q9UI95 211 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 MTMR7Q9Y216 660 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 SCN4AP35499 1836 aa16.53■□□□□ 0.24
HMGA1P1-201ENST00000415560 ASTN2O75129 1339 aaPredicted RBP16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 CTNND1O60716 968 aaKnown RBP16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 DTNBO60941 627 aa16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 SLURP2P0DP57 97 aa16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 NFKBIBQ15653 356 aa16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 V9GY48 417 aaPredicted RBP16.52■□□□□ 0.24
HMGA1P1-201ENST00000415560 DDX11L8A8MPP1 907 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 KLRF2D3W0D1 207 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 PPFIA3O75145 1194 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 PLEKHA8P1O95397 391 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 BAG4O95429 457 aaKnown RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 MCTP1Q6DN14 999 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 USP48Q86UV5 1035 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 FBXO18Q8NFZ0 1043 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 DCAF4Q8WV16 495 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 ZBTB21Q9ULJ3 1066 aa16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 POLR2AP24928 1970 aaKnown RBP16.51■□□□□ 0.23
HMGA1P1-201ENST00000415560 USP17L5A8MUK1 530 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 PDHBP11177 359 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 GUCY1A2P33402 732 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 MCM4P33991 863 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 GNL2Q13823 731 aaKnown RBP16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 SLFN13Q68D06 897 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 GMCL1P1Q8NEA9 526 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
HMGA1P1-201ENST00000415560 PHF20L1A8MW92 1017 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 RAD21O60216 631 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 SNHG28P0DPA3 235 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 NF2P35240 595 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 FOSBP53539 338 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 FUT2Q10981 343 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 CSPP1Q1MSJ5 1256 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 KRT40Q6A162 431 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 USP17L2Q6R6M4 530 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 CDAN1Q8IWY9 1227 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 FAM177A1Q8N128 213 aaPredicted RBP16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 STAG2Q8N3U4 1231 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 RRP36Q96EU6 259 aaKnown RBP16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 SPZ1Q9BXG8 430 aa16.49■□□□□ 0.23
HMGA1P1-201ENST00000415560 CNTNAP5Q8WYK1 1306 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 F5H6K3 240 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 SLC1A4P43007 532 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 KLRC3Q07444 240 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 ZNF543Q08ER8 600 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 RRP1BQ14684 758 aaKnown RBP16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 CCDC96Q2M329 555 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 ATL3Q6DD88 541 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 TAF1DQ9H5J8 278 aaPredicted RBP16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 AS3MTQ9HBK9 375 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 BRMS1Q9HCU9 246 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 SEC63Q9UGP8 760 aaKnown RBP16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 ZNF112Q9UJU3 913 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 ISY1Q9ULR0 285 aaKnown RBP16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 TMX2Q9Y320 296 aa16.48■□□□□ 0.23
HMGA1P1-201ENST00000415560 ATAD5Q96QE3 1844 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 GOLGA8HP0CJ92 632 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 SCG2P13521 617 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 GUCY1B3Q02153 619 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 BRAPQ7Z569 592 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
HMGA1P1-201ENST00000415560 SIAH1Q8IUQ4 282 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms