RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 GJD4Q96KN9 370 aaPredicted RBP8.78□□□□□ -1
SIK3-203ENST00000415541 CHCHD3Q9NX63 227 aaKnown RBP8.78□□□□□ -1
SIK3-203ENST00000415541 HMG20BQ9P0W2 317 aa8.78□□□□□ -1
SIK3-203ENST00000415541 SLC4A4Q9Y6R1 1079 aa8.78□□□□□ -1
SIK3-203ENST00000415541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.78□□□□□ -1
SIK3-203ENST00000415541 GOLGA8BA8MQT2 603 aa8.78□□□□□ -1
SIK3-203ENST00000415541 LARGE1O95461 756 aa8.78□□□□□ -1
SIK3-203ENST00000415541 RPS8P62241 208 aaKnown RBP8.78□□□□□ -1
SIK3-203ENST00000415541 VSNL1P62760 191 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ACTN3Q08043 901 aaPredicted RBP8.78□□□□□ -1
SIK3-203ENST00000415541 YTHDF3Q7Z739 585 aaKnown RBP8.78□□□□□ -1
SIK3-203ENST00000415541 ZNF589Q86UQ0 364 aaPredicted RBP8.78□□□□□ -1
SIK3-203ENST00000415541 RASSF8Q8NHQ8 419 aa8.78□□□□□ -1
SIK3-203ENST00000415541 PNKPQ96T60 521 aa8.78□□□□□ -1
SIK3-203ENST00000415541 JCADQ9P266 1359 aa8.78□□□□□ -1
SIK3-203ENST00000415541 RTN2O75298 545 aa8.78□□□□□ -1
SIK3-203ENST00000415541 PDE8BO95263 885 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ITPK1Q13572 414 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ME3Q16798 604 aa8.78□□□□□ -1
SIK3-203ENST00000415541 CCDC102BQ68D86 513 aa8.78□□□□□ -1
SIK3-203ENST00000415541 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
SIK3-203ENST00000415541 CCDC121Q6ZUS5 278 aa8.78□□□□□ -1
SIK3-203ENST00000415541 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
SIK3-203ENST00000415541 SMARCC2Q8TAQ2 1214 aa8.78□□□□□ -1
SIK3-203ENST00000415541 HOOK2Q96ED9 719 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ISCA1Q9BUE6 129 aa8.78□□□□□ -1
SIK3-203ENST00000415541 ZSWIM6Q9HCJ5 1215 aa8.78□□□□□ -1
SIK3-203ENST00000415541 SAMM50Q9Y512 469 aa8.78□□□□□ -1
SIK3-203ENST00000415541 NWD1Q149M9 1564 aa8.78□□□□□ -1
SIK3-203ENST00000415541 COL5A2P05997 1499 aaPredicted RBP8.77□□□□□ -1
SIK3-203ENST00000415541 IKBKBO14920 756 aa8.77□□□□□ -1
SIK3-203ENST00000415541 GPAA1O43292 621 aa8.77□□□□□ -1
SIK3-203ENST00000415541 MBD4O95243 580 aa8.77□□□□□ -1
SIK3-203ENST00000415541 CHGBP05060 677 aa8.77□□□□□ -1
SIK3-203ENST00000415541 LMOD1P29536 600 aaPredicted RBP8.77□□□□□ -1
SIK3-203ENST00000415541 FOXO4P98177 505 aa8.77□□□□□ -1
SIK3-203ENST00000415541 KARSQ15046 597 aaKnown RBP8.77□□□□□ -1
SIK3-203ENST00000415541 SAFBQ15424 915 aaKnown RBP eCLIP8.77□□□□□ -18e-6■□□□□ 10.3
SIK3-203ENST00000415541 ADCK5Q3MIX3 580 aa8.77□□□□□ -1
SIK3-203ENST00000415541 WDR93Q6P2C0 686 aa8.77□□□□□ -1
SIK3-203ENST00000415541 OLFM4Q6UX06 510 aa8.77□□□□□ -1
SIK3-203ENST00000415541 KRT27Q7Z3Y8 459 aa8.77□□□□□ -1
SIK3-203ENST00000415541 BRAPQ7Z569 592 aa8.77□□□□□ -1
SIK3-203ENST00000415541 HAUS7Q99871 368 aa8.77□□□□□ -1
SIK3-203ENST00000415541 SPATA31A5Q5VU36 1347 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 SPATA31A7Q8IWB4 1347 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 GOLGA6L10A6NI86 522 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 AP1G2O75843 785 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 SLC3A2P08195 630 aaKnown RBP8.77□□□□□ -1.01
SIK3-203ENST00000415541 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
SIK3-203ENST00000415541 KLF18A0A0U1RQI7 1052 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 GOLGA6BA6NDN3 693 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 LRRIQ3A6PVS8 624 aaPredicted RBP8.77□□□□□ -1.01
SIK3-203ENST00000415541 ERVV-1B6SEH8 477 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 RXRAP19793 462 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 FNTAP49354 379 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 NLRP12P59046 1061 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 CAPRIN2Q6IMN6 1127 aaKnown RBP8.77□□□□□ -1.01
SIK3-203ENST00000415541 MRPS27Q92552 414 aaKnown RBP8.77□□□□□ -1.01
SIK3-203ENST00000415541 KIFC2Q96AC6 838 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 OSBPL9Q96SU4 736 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 VCPKMTQ9H867 229 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 ARMT1Q9H993 441 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 SUGCTQ9HAC7 445 aa8.77□□□□□ -1.01
SIK3-203ENST00000415541 CAMTA1Q9Y6Y1 1673 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 PRPF6O94906 941 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 POLR3DP05423 398 aaPredicted RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 CHRNDQ07001 517 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 NCOA7Q8NI08 942 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 LSG1Q9H089 658 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 KIAA1468Q9P260 1216 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 ANAPC4Q9UJX5 808 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 SYF2O95926 243 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 TMEM67Q5HYA8 995 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 ZNF569Q5MCW4 686 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 VSTM4Q8IW00 320 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 APPBP2Q92624 585 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 KCNB2Q92953 911 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 CCDC47Q96A33 483 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 MKNK2Q9HBH9 465 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 HOOK1Q9UJC3 728 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 RCOR1Q9UKL0 485 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 ZNF532Q9HCE3 1301 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 RPSAP08865 295 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 VPS72Q15906 364 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 CCDC181Q5TID7 509 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 MFSD6Q6ZSS7 791 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 MAB21L3Q8N8X9 362 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 SPATA5Q8NB90 893 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 COG1Q8WTW3 980 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 ZBTB10Q96DT7 871 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 NAPGQ99747 312 aaPredicted RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 HPCAL4Q9UM19 191 aa8.76□□□□□ -1.01
SIK3-203ENST00000415541 CHD2O14647 1828 aaKnown RBP8.76□□□□□ -1.01
SIK3-203ENST00000415541 PRC1O43663 620 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 INHBEP58166 350 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 THOC1Q96FV9 657 aaKnown RBP8.75□□□□□ -1.01
SIK3-203ENST00000415541 ZKSCAN3Q9BRR0 538 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 SLC40A1Q9NP59 571 aa8.75□□□□□ -1.01
SIK3-203ENST00000415541 MROH5Q6ZUA9 1318 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms