RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 TICAM2Q86XR7 235 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 USP40Q9NVE5 1235 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 ZBTB21Q9ULJ3 1066 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 USP17L10C9JJH3 530 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 ARVCFO00192 962 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 LDHCP07864 332 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 IL15P40933 162 aaPredicted RBP7.7□□□□□ -1.18
LMBR1-204ENST00000415428 MRE11P49959 708 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 ERVK-21P61565 698 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 FAM178BQ8IXR5 827 aa7.7□□□□□ -1.18
LMBR1-204ENST00000415428 SCAF8Q9UPN6 1271 aaKnown RBP7.7□□□□□ -1.18
LMBR1-204ENST00000415428 TAF5LO75529 589 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 LDHBP07195 334 aaKnown RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 HTRA4P83105 476 aaPredicted RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 STK31Q9BXU1 1019 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 HDAC5Q9UQL6 1122 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 EFCAB14O75071 495 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 NT5C2P49902 561 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 RHOBTB2Q9BYZ6 727 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 GNEQ9Y223 722 aaKnown RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 FSD2A1L4K1 749 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 TMEM199Q8N511 208 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 ARHGAP45Q92619 1136 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 RNPC3Q96LT9 517 aaKnown RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 GNL3LQ9NVN8 582 aaKnown RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 BTBD7Q9P203 1132 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 ADAMTS8Q9UP79 889 aa7.69□□□□□ -1.18
LMBR1-204ENST00000415428 YBX2Q9Y2T7 364 aaKnown RBP7.69□□□□□ -1.18
LMBR1-204ENST00000415428 GRXCR2A6NFK2 248 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 CAND2O75155 1236 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 LRRFIP1Q32MZ4 808 aaKnown RBP7.68□□□□□ -1.18
LMBR1-204ENST00000415428 PORCNQ9H237 461 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 SYNRGQ9UMZ2 1314 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 LOC730098B7Z3J9 87 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 JAG1P78504 1218 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 PRKG1Q13976 671 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 DCDC2CA8MYV0 355 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 AKR1A1P14550 325 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 CCL14Q16627 93 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 TKFCQ3LXA3 575 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 NUP133Q8WUM0 1156 aa7.68□□□□□ -1.18
LMBR1-204ENST00000415428 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.68□□□□□ -1.186e-7■■□□□ 13.5
LMBR1-204ENST00000415428 NOC4LQ9BVI4 516 aaKnown RBP7.68□□□□□ -1.18
LMBR1-204ENST00000415428 MTIF3Q9H2K0 278 aaKnown RBP7.68□□□□□ -1.18
LMBR1-204ENST00000415428 SCN5AQ14524 2016 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 IGKV6D-41A0A0C4DH26 115 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 SMIM22K7EJ46 135 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 SH3RF1Q7Z6J0 888 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 MRPL50Q8N5N7 158 aaKnown RBP7.67□□□□□ -1.18
LMBR1-204ENST00000415428 PCSK9Q8NBP7 692 aaKnown RBP7.67□□□□□ -1.18
LMBR1-204ENST00000415428 FLT1P17948 1338 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 COBLO75128 1261 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 EYA4O95677 639 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 GADL1Q6ZQY3 521 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 PUS3Q9BZE2 481 aaKnown RBP7.67□□□□□ -1.18
LMBR1-204ENST00000415428 EPHX3Q9H6B9 360 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 HOXC10Q9NYD6 342 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 TMOD4Q9NZQ9 345 aa7.67□□□□□ -1.18
LMBR1-204ENST00000415428 KPNA6O60684 536 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 ACLYP53396 1101 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 RNF180Q86T96 592 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 MSRAQ9UJ68 235 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 KMT2BQ9UMN6 2715 aaPredicted RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 LINC00271P0C7V0 271 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 SYN1P17600 705 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 TMEM184AQ6ZMB5 413 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 RPAP2Q8IXW5 612 aaPredicted RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 EMID1Q96A84 441 aaPredicted RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 USP44Q9H0E7 712 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 PRKAG2Q9UGJ0 569 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 SWAP70Q9UH65 585 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 WDR46O15213 610 aaKnown RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 MDM2Q00987 491 aaPredicted RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 RPUSD2Q8IZ73 545 aaKnown RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 PRSS33Q8NF86 280 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 SMCR8Q8TEV9 937 aaPredicted RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 SIL1Q9H173 461 aa7.66□□□□□ -1.18
LMBR1-204ENST00000415428 LRRFIP2Q9Y608 721 aaKnown RBP7.66□□□□□ -1.18
LMBR1-204ENST00000415428 C1RP00736 705 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 TLE2Q04725 743 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 NAALADL2Q58DX5 795 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 SRCIN1Q9C0H9 1055 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 SPATC1LQ9H0A9 340 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 BICC1Q9H694 974 aaKnown RBP7.65□□□□□ -1.18
LMBR1-204ENST00000415428 RC3H2Q9HBD1 1191 aaKnown RBP7.65□□□□□ -1.18
LMBR1-204ENST00000415428 TMX2Q9Y320 296 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 UQCRFS1P1P0C7P4 283 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 BTDP43251 543 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 POLA2Q14181 598 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 MVPQ14764 893 aaKnown RBP7.65□□□□□ -1.18
LMBR1-204ENST00000415428 TRAF7Q6Q0C0 670 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 RPAINQ86UA6 219 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 ADHFE1Q8IWW8 467 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 MKL1Q969V6 931 aa7.65□□□□□ -1.18
LMBR1-204ENST00000415428 MOV10L1Q9BXT6 1211 aaKnown RBP7.65□□□□□ -1.18
LMBR1-204ENST00000415428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.65□□□□□ -1.189e-7■■□□□ 13
LMBR1-204ENST00000415428 VCAM1P19320 739 aa7.65□□□□□ -1.19
LMBR1-204ENST00000415428 PRDX5P30044 214 aa7.65□□□□□ -1.19
LMBR1-204ENST00000415428 MECOMQ03112 1051 aa7.65□□□□□ -1.19
LMBR1-204ENST00000415428 LRRC24Q50LG9 513 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms