RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 FKBP1CQ5VVH2 108 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 SLC44A5Q8NCS7 719 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 FBXO18Q8NFZ0 1043 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 NUP133Q8WUM0 1156 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
RFFL-205ENST00000415395 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 IL17RBQ9NRM6 502 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 FAM198AQ9UFP1 575 aa13.33□□□□□ -0.28
RFFL-205ENST00000415395 KIF5BP33176 963 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 NFIAQ12857 509 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 RESTQ13127 1097 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 DHX8Q14562 1220 aaKnown RBP13.32□□□□□ -0.28
RFFL-205ENST00000415395 DLGAP5Q15398 846 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 ANO6Q4KMQ2 910 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 FERMT3Q86UX7 667 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 CTCFLQ8NI51 663 aaPredicted RBP13.32□□□□□ -0.28
RFFL-205ENST00000415395 CCDC17Q96LX7 622 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 ZNF396Q96N95 335 aaPredicted RBP13.32□□□□□ -0.28
RFFL-205ENST00000415395 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 PI4KBQ9UBF8 816 aa13.32□□□□□ -0.28
RFFL-205ENST00000415395 NMT2O60551 498 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 DTNBO60941 627 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 DEXIO95424 95 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 LIG1P18858 919 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 ZNF75DP51815 510 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 NBPF11Q86T75 865 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 METTL16Q86W50 562 aaKnown RBP13.31□□□□□ -0.28
RFFL-205ENST00000415395 FOXP4Q8IVH2 680 aaPredicted RBP13.31□□□□□ -0.28
RFFL-205ENST00000415395 CCDC144CPQ8IYA2 1237 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 CRACR2BQ8N4Y2 399 aaPredicted RBP13.31□□□□□ -0.28
RFFL-205ENST00000415395 SPC24Q8NBT2 197 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 PRMT6Q96LA8 375 aaPredicted RBP13.31□□□□□ -0.28
RFFL-205ENST00000415395 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 PAXBP1Q9Y5B6 917 aa13.31□□□□□ -0.28
RFFL-205ENST00000415395 ZNF165P49910 485 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 GNAQP50148 359 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 CCDC73Q6ZRK6 1079 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 PNMA1Q8ND90 353 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 NLGN2Q8NFZ4 835 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 SLC26A6Q9BXS9 759 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 TDRD3Q9H7E2 651 aaKnown RBP13.3□□□□□ -0.28
RFFL-205ENST00000415395 FZD9O00144 591 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 TRIM29Q14134 588 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 CAMK4Q16566 473 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 STX1AQ16623 288 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 TMTC3Q6ZXV5 915 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 BRAPQ7Z569 592 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 PLA2G4DQ86XP0 818 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 PHKBQ93100 1093 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 ZBED3Q96IU2 234 aaPredicted RBP13.3□□□□□ -0.28
RFFL-205ENST00000415395 KCNF1Q9H3M0 494 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 PCDHAC2Q9Y5I4 1007 aa13.3□□□□□ -0.28
RFFL-205ENST00000415395 IGKV6D-41A0A0C4DH26 115 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 SMTNL1A8MU46 457 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 PRPF3O43395 683 aaKnown RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 MYO1BO43795 1136 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 TOP1P11387 765 aaKnown RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 SHMT1P34896 483 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 EIF6P56537 245 aaKnown RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 FUT2Q10981 343 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 GRM4Q14833 912 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 SARM1Q6SZW1 724 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 LUZP1Q86V48 1076 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 DPF2Q92785 391 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 LZTS2Q9BRK4 669 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 NAT10Q9H0A0 1025 aaKnown RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 PYCARDQ9ULZ3 195 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 ZBTB12Q9Y330 459 aaPredicted RBP13.29□□□□□ -0.28
RFFL-205ENST00000415395 SBF1O95248 1867 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 MYH4Q9Y623 1939 aa13.29□□□□□ -0.28
RFFL-205ENST00000415395 XBP1P17861 261 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 PTGS1P23219 599 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 FAM83AQ86UY5 434 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 CKAP2LQ8IYA6 745 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 FAM151AQ8WW52 585 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 CEP95Q96GE4 821 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 TMEM47Q9BQJ4 181 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 TRIM34Q9BYJ4 488 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 MTMR4Q9NYA4 1195 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 ZNF70Q9UC06 446 aaPredicted RBP13.28□□□□□ -0.28
RFFL-205ENST00000415395 CLIP2Q9UDT6 1046 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 HERC5Q9UII4 1024 aaKnown RBP13.28□□□□□ -0.28
RFFL-205ENST00000415395 STX8Q9UNK0 236 aa13.28□□□□□ -0.28
RFFL-205ENST00000415395 DDTLA6NHG4 134 aaPredicted RBP13.27□□□□□ -0.28
RFFL-205ENST00000415395 AP5Z1O43299 807 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 KINO60870 393 aaKnown RBP13.27□□□□□ -0.28
RFFL-205ENST00000415395 CACNB3P54284 484 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 RASSF7Q02833 373 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 TCP10Q12799 353 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 TATDN1Q6P1N9 297 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 SH3BP5LQ7L8J4 393 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 CCDC186Q7Z3E2 898 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 ZSCAN29Q8IWY8 852 aaPredicted RBP13.27□□□□□ -0.28
RFFL-205ENST00000415395 ZFPM1Q8IX07 1006 aa13.27□□□□□ -0.28
RFFL-205ENST00000415395 MRFAP1L1Q96HT8 127 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms