RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 SLC5A4Q9NY91 659 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 FBXO3Q9UK99 471 aa16.52■□□□□ 0.24
RAPGEF1-204ENST00000414781 ATAD5Q96QE3 1844 aa16.52■□□□□ 0.23
RAPGEF1-204ENST00000414781 STRNO43815 780 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 TIMP1P01033 207 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 GNAI2P04899 355 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 LDHCP07864 332 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 ANO1Q5XXA6 986 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 PSRC1Q6PGN9 363 aaPredicted RBP16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 RNF180Q86T96 592 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 SLC28A3Q9HAS3 691 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 CEP126Q9P2H0 1117 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 NRBP1Q9UHY1 535 aa16.51■□□□□ 0.23
RAPGEF1-204ENST00000414781 CHD9Q3L8U1 2897 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 MRE11P49959 708 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 KCNQ1P51787 676 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 MECOMQ03112 1051 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 TFF2Q03403 129 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 MFSD5Q6N075 450 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 TRIM34Q9BYJ4 488 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 MTIF3Q9H2K0 278 aaKnown RBP16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 XPNPEP3Q9NQH7 507 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
RAPGEF1-204ENST00000414781 GRXCR1A8MXD5 290 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 CIAO1O76071 339 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 RARBP10826 455 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 ADORA2AP29274 412 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 USP14P54578 494 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 FAAP100Q0VG06 881 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 TMEM240Q5SV17 173 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 CCDC102BQ68D86 513 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 ATG9AQ7Z3C6 839 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 MEIS3Q99687 375 aa16.49■□□□□ 0.23
RAPGEF1-204ENST00000414781 ZNF236Q9UL36 1845 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 A0A1W2PQ45 241 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 A0A1W2PQY0 241 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 METTL16Q86W50 562 aaKnown RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 RPAP2Q8IXW5 612 aaPredicted RBP16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 TEX11Q8IYF3 940 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 C11orf16Q9NQ32 467 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 TBX21Q9UL17 535 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 COG5Q9UP83 839 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 GTF3C3Q9Y5Q9 886 aa16.48■□□□□ 0.23
RAPGEF1-204ENST00000414781 JAG1P78504 1218 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 CATSPERGQ6ZRH7 1159 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 MICALL1Q8N3F8 863 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 CRACR2BQ8N4Y2 399 aaPredicted RBP16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 TMEM199Q8N511 208 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 FEZ1Q99689 392 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 BTBD7Q9P203 1132 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 ROBO3Q96MS0 1386 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 MYO9BQ13459 2157 aa16.47■□□□□ 0.23
RAPGEF1-204ENST00000414781 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 SMIM22K7EJ46 135 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 GDF11O95390 407 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 SHCBP1Q8NEM2 672 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 NUP133Q8WUM0 1156 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 NOL10Q9BSC4 688 aaKnown RBP16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 TSEN34Q9BSV6 310 aaKnown RBP16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 NKX2-4Q9H2Z4 354 aa16.46■□□□□ 0.23
RAPGEF1-204ENST00000414781 PRR33A8MZF0 331 aa16.45■□□□□ 0.22
RAPGEF1-204ENST00000414781 HMMRO75330 724 aa16.45■□□□□ 0.22
RAPGEF1-204ENST00000414781 ABRAQ8N0Z2 381 aa16.45■□□□□ 0.22
RAPGEF1-204ENST00000414781 DNAJC18Q9H819 358 aa16.45■□□□□ 0.22
RAPGEF1-204ENST00000414781 STARD7Q9NQZ5 370 aa16.45■□□□□ 0.22
RAPGEF1-204ENST00000414781 FAM86C2PA6NEL3 165 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 SPDYE16A6NNV3 312 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 PI4K2BG5E9Z4 385 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 GTPBP6O43824 516 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 PLCG2P16885 1265 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 VCAM1P19320 739 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 IL15P40933 162 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 ZNF365Q70YC5 407 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 ZNF384Q8TF68 577 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 NSUN4Q96CB9 384 aaKnown RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 KCNH6Q9H252 994 aa16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 RWDD1Q9H446 243 aaPredicted RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
RAPGEF1-204ENST00000414781 XIRP2A4UGR9 3374 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 CACNA1AO00555 2505 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 TLL1O43897 1013 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 COBLO75128 1261 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 POU3F3P20264 500 aaPredicted RBP16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 PRAMEF19Q5SWL8 479 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 PPP2R2DQ66LE6 453 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 CCDC136Q96JN2 1154 aa16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 MOV10L1Q9BXT6 1211 aaKnown RBP16.43■□□□□ 0.22
RAPGEF1-204ENST00000414781 PLXNA1Q9UIW2 1896 aa16.42■□□□□ 0.22
RAPGEF1-204ENST00000414781 MOXD2PA6NHM9 499 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms