RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 GDF11O95390 407 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 ZKSCAN1P17029 563 aaPredicted RBP10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 ARID4AP29374 1257 aaPredicted RBP10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 CCND3P30281 292 aaPredicted RBP10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 MCAMP43121 646 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 HERVK_113P62684 666 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 GSTO1P78417 241 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 TMEM259Q4ZIN3 620 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 UBE2OQ9C0C9 1292 aaKnown RBP10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 MTMR10Q9NXD2 777 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 HERC5Q9UII4 1024 aaKnown RBP10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 AKAP2Q9Y2D5 859 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 STXBP5LQ9Y2K9 1186 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 ADGRG1Q9Y653 693 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 A0A0G2JMZ2 1700 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 PARP14Q460N5 1801 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 ZNF236Q9UL36 1845 aa10.1□□□□□ -0.79
UPF3AP1-201ENST00000413731 FLT1P17948 1338 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 MAP4K4O95819 1239 aaPredicted RBP10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 LDHCP07864 332 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 COL6A1P12109 1028 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 BACE1P56817 501 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 CACNB2Q08289 660 aaPredicted RBP10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 CCL14Q16627 93 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 LRRC26Q2I0M4 334 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 POTEEQ6S8J3 1075 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 NEUROD6Q96NK8 337 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 P2RX7Q99572 595 aaKnown RBP10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 APBA2Q99767 749 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 WDR18Q9BV38 432 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 PORCNQ9H237 461 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 AATFQ9NY61 560 aaKnown RBP eCLIP10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 TMOD4Q9NZQ9 345 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 DDX19BQ9UMR2 479 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 UNC80Q8N2C7 3258 aa10.09□□□□□ -0.79
UPF3AP1-201ENST00000413731 ASNSP08243 561 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 XRCC5P13010 732 aaKnown RBP10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 HOXA7P31268 230 aaPredicted RBP10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 ERVK-9P63128 1117 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 ERVK-24P63145 666 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 MTX1Q13505 466 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 PDE3AQ14432 1141 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 GPR142Q7Z601 462 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 ADGRA1Q86SQ6 560 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 MAPKAPK5Q8IW41 473 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 GPRC5AQ8NFJ5 357 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 USP6NLQ92738 828 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 PAGR1Q9BTK6 254 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 PI4KBQ9UBF8 816 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 ZBTB21Q9ULJ3 1066 aa10.08□□□□□ -0.8
UPF3AP1-201ENST00000413731 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 MAPK4P31152 587 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 RGS2P41220 211 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 RRP1P56182 461 aaKnown RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 OS9Q13438 667 aaPredicted RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 Q3C1V9 767 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 MORN1Q5T089 497 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 GORABQ5T7V8 394 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 LHX8Q68G74 356 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 NAA16Q6N069 864 aaPredicted RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 TGFBRAP1Q8WUH2 860 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 NOL10Q9BSC4 688 aaKnown RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 CHMP4BQ9H444 224 aaKnown RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 RBPJLQ9UBG7 517 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 PCDHGA4Q9Y5G9 962 aa10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 ZNFX1Q9P2E3 1918 aaKnown RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 COL11A1P12107 1806 aaPredicted RBP10.07□□□□□ -0.8
UPF3AP1-201ENST00000413731 DNAH12Q6ZR08 3092 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 C19orf81C9J6K1 198 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 USP17L10C9JJH3 530 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 CNMDO75829 334 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 GABBR2O75899 941 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 C6orf132Q5T0Z8 1188 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 C20orf194Q5TEA3 1177 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 PLEKHH3Q7Z736 793 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 TRMT44Q8IYL2 757 aaKnown RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 CRACR2BQ8N4Y2 399 aaPredicted RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 GUCD1Q96NT3 240 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 COL25A1Q9BXS0 654 aaPredicted RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 TRIM34Q9BYJ4 488 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 DHX36Q9H2U1 1008 aaKnown RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 GDPD2Q9HCC8 539 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 FLRT1Q9NZU1 646 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 LIMD1Q9UGP4 676 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 SAP30BPQ9UHR5 308 aaKnown RBP10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 PALD1Q9ULE6 856 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 PLXNA1Q9UIW2 1896 aa10.06□□□□□ -0.8
UPF3AP1-201ENST00000413731 LAMA2P24043 3122 aaKnown RBP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 UQCRFS1P1P0C7P4 283 aa10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 ABL2P42684 1182 aa10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 G3BP1Q13283 466 aaKnown RBP eCLIP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 ZYXQ15942 572 aaKnown RBP10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
UPF3AP1-201ENST00000413731 CEP85Q6P2H3 762 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms