RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 WWC3Q9ULE0 1092 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 WDR19Q8NEZ3 1342 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
SIK3-202ENST00000413553 GNPATO15228 680 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 COBLO75128 1261 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 GYPCP04921 128 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 TUBBP07437 444 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 PTPREP23469 700 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 TMEM67Q5HYA8 995 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 SPATA1Q5VX52 437 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 KANK3Q6NY19 840 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 BICDL1Q6ZP65 573 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 USP49Q70CQ1 688 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 CTAGE1Q96RT6 745 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 YY1AP1Q9H869 796 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 BRMS1Q9HCU9 246 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 ADD3Q9UEY8 706 aaKnown RBP10.08□□□□□ -0.8
SIK3-202ENST00000413553 GUCA1BQ9UMX6 200 aa10.08□□□□□ -0.8
SIK3-202ENST00000413553 TOB1P50616 345 aaPredicted RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 IFIT5Q13325 482 aaKnown RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 DNAJC21Q5F1R6 531 aaKnown RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 EFCAB13Q8IY85 973 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 RIN2Q8WYP3 895 aaPredicted RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 NBPF3Q9H094 633 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 PCDHB6Q9Y5E3 794 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 ATRNO75882 1429 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 ENC1O14682 589 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 ACTN4O43707 911 aaKnown RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 TRIM37O94972 964 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 ERVK-24P63145 666 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 SART3Q15020 963 aaKnown RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 MAP9Q49MG5 647 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 FAM196AQ6ZSG2 479 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 SMIM5Q71RC9 77 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 TMTC1Q8IUR5 882 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 ELOA2Q8IYF1 753 aaPredicted RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 CTCFLQ8NI51 663 aaPredicted RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 CSRNP2Q9H175 543 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 SLC12A7Q9Y666 1083 aa10.07□□□□□ -0.8
SIK3-202ENST00000413553 MYO5AQ9Y4I1 1855 aaKnown RBP10.07□□□□□ -0.8
SIK3-202ENST00000413553 N4BP3O15049 544 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 ZPR1O75312 459 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CD44P16070 742 aaKnown RBP10.06□□□□□ -0.8
SIK3-202ENST00000413553 GUCY2CP25092 1073 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CDC25AP30304 524 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 GUCY1A2P33402 732 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 NR5A1Q13285 461 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 NTRK3Q16288 839 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 RILPL1Q5EBL4 403 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 APTXQ7Z2E3 356 aaKnown RBP10.06□□□□□ -0.8
SIK3-202ENST00000413553 TADA2BQ86TJ2 420 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CAPZA3Q96KX2 299 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CRACR2AQ9BSW2 395 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.06□□□□□ -0.82e-6■■■□□ 14.7
SIK3-202ENST00000413553 RTCBQ9Y3I0 505 aaKnown RBP10.06□□□□□ -0.8
SIK3-202ENST00000413553 ZMYND10O75800 440 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 SYF2O95926 243 aaKnown RBP10.06□□□□□ -0.8
SIK3-202ENST00000413553 MMP1P03956 469 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 E2F4Q16254 413 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CYP26C1Q6V0L0 522 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.06□□□□□ -0.8
SIK3-202ENST00000413553 CCDC51Q96ER9 411 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 VPS16Q9H269 839 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 ABHD10Q9NUJ1 306 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 CTNND2Q9UQB3 1225 aa10.06□□□□□ -0.8
SIK3-202ENST00000413553 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.06□□□□□ -0.8
SIK3-202ENST00000413553 IFIT3O14879 490 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 PBX1P40424 430 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 STIM1Q13586 685 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 GSPT2Q8IYD1 628 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 TRIM22Q8IYM9 498 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 GPATCH11Q8N954 259 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 WASF1Q92558 559 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 TMEM87BQ96K49 555 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 TRIM10Q9UDY6 481 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 IDH1O75874 414 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 CAMTA2O94983 1202 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 CMTR1Q8N1G2 835 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 RABEP2Q9H5N1 569 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 HPCAL4Q9UM19 191 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 CEP131Q9UPN4 1083 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 MCM3P25205 808 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 KRT9P35527 623 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 ARHGAP25P42331 645 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 USP14P54578 494 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 SUSD4Q5VX71 490 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 ZNF34Q8IZ26 560 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 CAGE1Q8TC20 777 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 STAMQ92783 540 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 VIPAS39Q9H9C1 493 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 LY9Q9HBG7 655 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 CABP5Q9NP86 173 aa10.05□□□□□ -0.8
SIK3-202ENST00000413553 FAM217BQ9NTX9 383 aaPredicted RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 SRPRBQ9Y5M8 271 aaKnown RBP10.05□□□□□ -0.8
SIK3-202ENST00000413553 PES1O00541 588 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms