RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 WNT7AO00755 349 aa21.56■■□□□ 1.04
TNFRSF8-202ENST00000413146 MFAP3LO75121 409 aa21.56■■□□□ 1.04
TNFRSF8-202ENST00000413146 CAMTA2O94983 1202 aa21.56■■□□□ 1.04
TNFRSF8-202ENST00000413146 CYP2D7A0A087X1C5 515 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 KIF5CO60282 957 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 DDAH1O94760 285 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 CRKLP46109 303 aaKnown RBP21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 GYG1P46976 350 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 CNGA4Q8IV77 575 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 BRIP1Q9BX63 1249 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 IRX2Q9BZI1 471 aaPredicted RBP21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 ARFGAP3Q9NP61 516 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 CTNND2Q9UQB3 1225 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 A0A0G2JS52 829 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 PCP11498 1178 aaKnown RBP21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 TROAPQ12815 778 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 TMTC3Q6ZXV5 915 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 TNFRSF25Q93038 417 aa21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 COL14A1Q05707 1796 aaKnown RBP21.55■■□□□ 1.04
TNFRSF8-202ENST00000413146 ERICH4A6NGS2 130 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 TBC1D8O95759 1140 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 DYNLL1P63167 89 aaKnown RBP21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 ATP2C1P98194 919 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 PTGDRQ13258 359 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 PARD6BQ9BYG5 372 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 CASP14P31944 242 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 JAKMIP3Q5VZ66 844 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 IQUBQ8NA54 791 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 CCDC51Q96ER9 411 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 COL1A1P02452 1464 aaPredicted RBP21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 ITIH6Q6UXX5 1313 aa21.54■■□□□ 1.04
TNFRSF8-202ENST00000413146 MYH8P13535 1937 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 TULP1O00294 542 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 ATP6V1AP38606 617 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 NOM1Q5C9Z4 860 aaKnown RBP21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 CNTNAP5Q8WYK1 1306 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 A0A1B0GUL6 1792 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 TXLNAP40222 546 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 NPY5RQ15761 445 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 RASGRP2Q7LDG7 609 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 CTCFLQ8NI51 663 aaPredicted RBP21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 STAMQ92783 540 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 PYM1Q9BRP8 204 aaKnown RBP21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 MYH13Q9UKX3 1938 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 XDHP47989 1333 aa21.53■■□□□ 1.04
TNFRSF8-202ENST00000413146 WNK3Q9BYP7 1800 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 POLR3GO15318 223 aaPredicted RBP21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 SASH3O75995 380 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 GYPCP04921 128 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 CYP2C19P33261 490 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 CHMP4BP1P59074 171 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 CAVIN4Q5BKX8 364 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 COL4A1P02462 1669 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 CCT6AP40227 531 aaKnown RBP21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 SRGAP1Q7Z6B7 1085 aa21.52■■□□□ 1.04
TNFRSF8-202ENST00000413146 RRAGBQ5VZM2 374 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 ANKRD18AQ8IVF6 992 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 BLZF1Q9H2G9 400 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 N4BP3O15049 544 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 FGRP09769 529 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 FXR1P51114 621 aaKnown RBP eCLIP21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 NLRP5P59047 1200 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 UBE4AQ14139 1066 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 E2F4Q16254 413 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZNF569Q5MCW4 686 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 CTR9Q6PD62 1173 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 PIK3AP1Q6ZUJ8 805 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 CEP112Q8N8E3 955 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 ANKRD20A12PQ8NF67 263 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 ZSWIM4Q9H7M6 989 aa21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 TTF2Q9UNY4 1162 aaKnown RBP21.51■■□□□ 1.03
TNFRSF8-202ENST00000413146 SCN7AQ01118 1682 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 TRAPPC10P48553 1259 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 SPAG1Q07617 926 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 KRT31Q15323 416 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 UBXN6Q9BZV1 441 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 LIMA1Q9UHB6 759 aaKnown RBP21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 CDC23Q9UJX2 597 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 RREB1Q92766 1687 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 A0A0U1RQJ8 604 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 GTPBP6O43824 516 aaPredicted RBP21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 PAK1Q13153 545 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 TUBB2AQ13885 445 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 SRBD1Q8N5C6 995 aaKnown RBP21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 ATRIPQ8WXE1 791 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 TUBB2BQ9BVA1 445 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 RWDD2AQ9UIY3 292 aa21.5■■□□□ 1.03
TNFRSF8-202ENST00000413146 CCDC151A5D8V7 595 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 USP17L12C9JPN9 530 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 USP17L21D6R901 530 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 SCG2P13521 617 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 FECHP22830 423 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 OAS2P29728 719 aaKnown RBP21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 SMC1AQ14683 1233 aaKnown RBP21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 KIF4BQ2VIQ3 1234 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 PDXDC2PQ6P474 469 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 TMTC1Q8IUR5 882 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 LAMB1P07942 1786 aa21.49■■□□□ 1.03
TNFRSF8-202ENST00000413146 CTAGE9A4FU28 777 aa21.48■■□□□ 1.03
TNFRSF8-202ENST00000413146 COBLO75128 1261 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms