RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 MICU3Q86XE3 530 aa30.37■■■□□ 2.45
RHBDD3-203ENST00000413137 ZNF274Q96GC6 653 aaPredicted RBP30.37■■■□□ 2.45
RHBDD3-203ENST00000413137 DTNBO60941 627 aa30.36■■■□□ 2.45
RHBDD3-203ENST00000413137 CATIPQ7Z7H3 387 aa30.36■■■□□ 2.45
RHBDD3-203ENST00000413137 NUP133Q8WUM0 1156 aa30.36■■■□□ 2.45
RHBDD3-203ENST00000413137 ZHX2Q9Y6X8 837 aa30.36■■■□□ 2.45
RHBDD3-203ENST00000413137 ZBTB43O43298 467 aa30.35■■■□□ 2.45
RHBDD3-203ENST00000413137 SLC4A3P48751 1232 aa30.35■■■□□ 2.45
RHBDD3-203ENST00000413137 KIAA1755Q5JYT7 1200 aa30.35■■■□□ 2.45
RHBDD3-203ENST00000413137 C2orf69Q8N8R5 385 aa30.35■■■□□ 2.45
RHBDD3-203ENST00000413137 NCOA5Q9HCD5 579 aaKnown RBP30.35■■■□□ 2.45
RHBDD3-203ENST00000413137 TRPM7Q96QT4 1865 aa30.34■■■□□ 2.45
RHBDD3-203ENST00000413137 FKBP1BP68106 108 aa30.34■■■□□ 2.45
RHBDD3-203ENST00000413137 ARHGEF10LQ9HCE6 1279 aa30.34■■■□□ 2.45
RHBDD3-203ENST00000413137 TMX2Q9Y320 296 aa30.34■■■□□ 2.45
RHBDD3-203ENST00000413137 PFKFB2O60825 505 aa30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 SCRN1Q12765 414 aa30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 DGKZQ13574 1117 aa30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 ZYXQ15942 572 aaKnown RBP30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 PPP4R3BQ5MIZ7 849 aa30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 ZSCAN31Q96LW9 406 aaPredicted RBP30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 FAM217BQ9NTX9 383 aaPredicted RBP30.33■■■□□ 2.45
RHBDD3-203ENST00000413137 CDC27P30260 824 aa30.32■■■□□ 2.45
RHBDD3-203ENST00000413137 SPP2Q13103 211 aa30.32■■■□□ 2.45
RHBDD3-203ENST00000413137 DDAH1O94760 285 aa30.32■■■□□ 2.44
RHBDD3-203ENST00000413137 SYNE3Q6ZMZ3 975 aa30.32■■■□□ 2.44
RHBDD3-203ENST00000413137 WDR18Q9BV38 432 aa30.32■■■□□ 2.44
RHBDD3-203ENST00000413137 SLKQ9H2G2 1235 aaPredicted RBP30.32■■■□□ 2.44
RHBDD3-203ENST00000413137 AFG3L2Q9Y4W6 797 aa30.32■■■□□ 2.44
RHBDD3-203ENST00000413137 TRIM75PA6NK02 468 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 F5H6K3 240 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 RAD21O60216 631 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 METAP2P50579 478 aaKnown RBP eCLIP30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 KLRC3Q07444 240 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 CCDC83Q8IWF9 413 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 ZNF280CQ8ND82 737 aa30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 SH2B1Q9NRF2 756 aaPredicted RBP30.31■■■□□ 2.44
RHBDD3-203ENST00000413137 MYH4Q9Y623 1939 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 GOLGA8AA7E2F4 631 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 ADD1P35611 737 aaKnown RBP30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 MTMR2Q13614 643 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 USP17L2Q6R6M4 530 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 SPICE1Q8N0Z3 855 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 FANCBQ8NB91 859 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 GTF3C6Q969F1 213 aa30.3■■■□□ 2.44
RHBDD3-203ENST00000413137 NDUFB10O96000 172 aa30.29■■■□□ 2.44
RHBDD3-203ENST00000413137 PDHBP11177 359 aa30.29■■■□□ 2.44
RHBDD3-203ENST00000413137 OTUD5Q96G74 571 aa30.29■■■□□ 2.44
RHBDD3-203ENST00000413137 FEZ1Q99689 392 aa30.29■■■□□ 2.44
RHBDD3-203ENST00000413137 PHIPQ8WWQ0 1821 aa30.29■■■□□ 2.44
RHBDD3-203ENST00000413137 SPDYE5A6NIY4 337 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 GJA5P36382 358 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 BECN1Q14457 450 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 SLFN13Q68D06 897 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 ERO1BQ86YB8 467 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 STAG2Q8N3U4 1231 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 GMCL1P1Q8NEA9 526 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 OPTNQ96CV9 577 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 SLC10A4Q96EP9 437 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 AS3MTQ9HBK9 375 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 PPFIA3O75145 1194 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 GOLGA8HP0CJ92 632 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 SNHG28P0DPA3 235 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 FSTL1Q12841 308 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 GRM4Q14833 912 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 CMTR1Q8N1G2 835 aaKnown RBP30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 NUP88Q99567 741 aaPredicted RBP30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 KIAA1683Q9H0B3 1180 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 VCPKMTQ9H867 229 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 MAD2L2Q9UI95 211 aa30.28■■■□□ 2.44
RHBDD3-203ENST00000413137 FRMPD2Q68DX3 1309 aaPredicted RBP30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 USP17L10C9JJH3 530 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 IRF6O14896 467 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 HUNKP57058 714 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 RTN1Q16799 776 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 SPRYD3Q8NCJ5 442 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 EMILIN3Q9NT22 766 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 FOXD4L1Q9NU39 408 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 SYNPO2Q9UMS6 1093 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 NID2Q14112 1375 aa30.27■■■□□ 2.44
RHBDD3-203ENST00000413137 UNCXA6NJT0 531 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 CALM1P0DP23 149 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 CALM2P0DP24 149 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 CALM3P0DP25 149 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 RCAN1P53805 252 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 BACE1P56817 501 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 PPATQ06203 517 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 CUL4AQ13619 759 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 SAPCD2Q86UD0 394 aa30.26■■■□□ 2.43
RHBDD3-203ENST00000413137 PLEKHA8P1O95397 391 aa30.25■■■□□ 2.43
RHBDD3-203ENST00000413137 CTDNEP1O95476 244 aa30.25■■■□□ 2.43
RHBDD3-203ENST00000413137 GOPCQ9HD26 462 aa30.25■■■□□ 2.43
RHBDD3-203ENST00000413137 PALM3A6NDB9 673 aaPredicted RBP30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 KCTD1Q719H9 257 aa30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 NBPF11Q86T75 865 aa30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 CTCFLQ8NI51 663 aaPredicted RBP30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 MAP3K14Q99558 947 aa30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 CPVLQ9H3G5 476 aa30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 SH2D4AQ9H788 454 aa30.24■■■□□ 2.43
RHBDD3-203ENST00000413137 HMGCS2P54868 508 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms