RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 SLC15A5A6NIM6 579 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 RFXAPO00287 272 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 GLRX3O76003 335 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 TIMP1P01033 207 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 LDHBP07195 334 aaKnown RBP11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 CAP2P40123 477 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 HSP90AB4PQ58FF6 505 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 FAM47AQ5JRC9 791 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 PRAMEF19Q5SWL8 479 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 KAZALD1Q96I82 304 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 OSBPL3Q9H4L5 887 aa11.54□□□□□ -0.56
SOX9-AS1-201ENST00000412640 SEPT4O43236 478 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 SRGAP3O43295 1099 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 TBC1D12O60347 775 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 PDE8BO95263 885 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 HOXC6P09630 235 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 CSF2RAP15509 400 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 RABGGTBP53611 331 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 BACE1P56817 501 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 CSPP1Q1MSJ5 1256 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 KRT40Q6A162 431 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 MFSD5Q6N075 450 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 ANKS1AQ92625 1134 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 SUCLG2Q96I99 432 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 LRRCC1Q9C099 1032 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 AS3MTQ9HBK9 375 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 ZBTB47Q9UFB7 747 aaPredicted RBP11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 COG5Q9UP83 839 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 PHF24Q9UPV7 400 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 RFX7Q2KHR2 1363 aa11.53□□□□□ -0.56
SOX9-AS1-201ENST00000412640 DCDC2CA8MYV0 355 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ST18O60284 1047 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 CNMDO75829 334 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 IGHA2P01877 340 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 MYOGP15173 224 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 RABL6Q3YEC7 729 aaPredicted RBP11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PPP2R2DQ66LE6 453 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 HLA-CQ95604 372 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 EXOC6BQ9Y2D4 811 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 MTCH2Q9Y6C9 303 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 IVNS1ABPQ9Y6Y0 642 aa11.52□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ATAD5Q96QE3 1844 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GBF1Q92538 1859 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 A0A1W2PQ45 241 aaPredicted RBP11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 A0A1W2PQY0 241 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 CCNA1P78396 465 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 FOXK2Q01167 660 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GRB14Q14449 540 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 CCDC174Q6PII3 467 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 DPP9Q86TI2 863 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 WDR18Q9BV38 432 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 BICC1Q9H694 974 aaKnown RBP11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 RABGAP1Q9Y3P9 1069 aa11.51□□□□□ -0.57
SOX9-AS1-201ENST00000412640 APBB1O00213 710 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GTPBP6O43824 516 aaPredicted RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 SMARCA5O60264 1052 aaPredicted RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PGK1P00558 417 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 IFIT1P09914 478 aaKnown RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ANP32AP39687 249 aaKnown RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 JAG1P78504 1218 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 SHROOM1Q2M3G4 852 aaPredicted RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 TTC22Q5TAA0 569 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ANKRD33Q7Z3H0 272 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GTF3C2Q8WUA4 911 aaPredicted RBP11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 KIF1BPQ96EK5 621 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 KCNH6Q9H252 994 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 CERS4Q9HA82 394 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 XPNPEP3Q9NQH7 507 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 TBX21Q9UL17 535 aa11.5□□□□□ -0.57
SOX9-AS1-201ENST00000412640 TRANK1O15050 2925 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 USP34Q70CQ2 3546 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 SURF6O75683 361 aaKnown RBP11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GSPT1P15170 499 aaKnown RBP11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 FGFR2P21802 821 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PDE1AP54750 535 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 OLFML2BQ68BL8 750 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PSRC1Q6PGN9 363 aaPredicted RBP11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ERC1Q8IUD2 1116 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GJD3Q8N144 294 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 RHPN1Q8TCX5 695 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 OTUD7AQ8TE49 926 aaPredicted RBP11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 CFAP54Q96N23 3096 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 GAKO14976 1311 aa11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 PRRC2BQ5JSZ5 2229 aaKnown RBP11.49□□□□□ -0.57
SOX9-AS1-201ENST00000412640 EIF5BO60841 1220 aaKnown RBP11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 SEC24BO95487 1268 aa11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 ADORA2AP29274 412 aa11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 SSTR3P32745 418 aaPredicted RBP11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 BTDP43251 543 aa11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
SOX9-AS1-201ENST00000412640 KLHDC4Q8TBB5 520 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms