RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MORC1Q86VD1 984 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 C12orf50Q8NA57 414 aaPredicted RBP7.1□□□□□ -1.27
LINC00342-201ENST00000412393 FLCNQ8NFG4 579 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 PDGFDQ9GZP0 370 aaPredicted RBP7.1□□□□□ -1.27
LINC00342-201ENST00000412393 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
LINC00342-201ENST00000412393 CYP27B1O15528 508 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 ZBTB7AO95365 584 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 RPLP1P05386 114 aaKnown RBP7.09□□□□□ -1.27
LINC00342-201ENST00000412393 PRKCSHP14314 528 aaPredicted RBP7.09□□□□□ -1.27
LINC00342-201ENST00000412393 ZNF827Q17R98 1081 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 ZAR1Q86SH2 424 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 PAK6Q9NQU5 681 aaPredicted RBP7.09□□□□□ -1.27
LINC00342-201ENST00000412393 SPG7Q9UQ90 795 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 C5P01031 1676 aa7.09□□□□□ -1.27
LINC00342-201ENST00000412393 VIRMAQ69YN4 1812 aaKnown RBP7.08□□□□□ -1.28
LINC00342-201ENST00000412393 PAPLNO95428 1278 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 ZAP70P43403 619 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 USP11P51784 963 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 COL19A1Q14993 1142 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 NFKBIBQ15653 356 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 PKN1Q16512 942 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 LCE4AQ5TA78 99 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 MPRIPQ6WCQ1 1025 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 EZH1Q92800 747 aaPredicted RBP7.08□□□□□ -1.28
LINC00342-201ENST00000412393 KRTAP4-11Q9BYQ6 195 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 MTFR1LQ9H019 292 aa7.08□□□□□ -1.28
LINC00342-201ENST00000412393 SOX17Q9H6I2 414 aaPredicted RBP7.08□□□□□ -1.28
LINC00342-201ENST00000412393 CCNL1Q9UK58 526 aaPredicted RBP7.08□□□□□ -1.28
LINC00342-201ENST00000412393 IGSF1Q8N6C5 1336 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
LINC00342-201ENST00000412393 LMOD1P29536 600 aaPredicted RBP7.07□□□□□ -1.28
LINC00342-201ENST00000412393 DUSP27Q5VZP5 1158 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 IFNL2Q8IZJ0 200 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 STK11IPQ8N1F8 1099 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 CALR3Q96L12 384 aaKnown RBP7.07□□□□□ -1.28
LINC00342-201ENST00000412393 TBC1D32Q96NH3 1257 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 COL24A1Q17RW2 1714 aa7.07□□□□□ -1.28
LINC00342-201ENST00000412393 PDE2AO00408 941 aaPredicted RBP7.06□□□□□ -1.28
LINC00342-201ENST00000412393 PHKG2P15735 406 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
LINC00342-201ENST00000412393 SPOCD1Q6ZMY3 1216 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 SLC7A3Q8WY07 619 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 SMARCC1Q92922 1105 aaPredicted RBP7.06□□□□□ -1.28
LINC00342-201ENST00000412393 PMEPA1Q969W9 287 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 TFCP2L1Q9NZI6 479 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 UBR3Q6ZT12 1888 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 PALLDQ8WX93 1383 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 PLEKHG2Q9H7P9 1386 aa7.06□□□□□ -1.28
LINC00342-201ENST00000412393 SCN11AQ9UI33 1791 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 PNPLA7Q6ZV29 1317 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 C4BP0C0L5 1744 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 HMGB2P26583 209 aaKnown RBP7.05□□□□□ -1.28
LINC00342-201ENST00000412393 PLEKHO1Q53GL0 409 aaPredicted RBP7.05□□□□□ -1.28
LINC00342-201ENST00000412393 CC2D1BQ5T0F9 858 aaKnown RBP7.05□□□□□ -1.28
LINC00342-201ENST00000412393 PIGBQ92521 554 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 SAP130Q9H0E3 1048 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 ELP3Q9H9T3 547 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 DZANK1Q9NVP4 752 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 TMOD3Q9NYL9 352 aa7.05□□□□□ -1.28
LINC00342-201ENST00000412393 CHD4Q14839 1912 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 NFKBIEO00221 500 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 TNFRSF10BO14763 440 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 CYP2E1P05181 493 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 HSP90AB1P08238 724 aaKnown RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 IL13P35225 146 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 MTHFSP49914 203 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 IKBKEQ14164 716 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 AMOTQ4VCS5 1084 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 ZNF530Q6P9A1 599 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 ATG4DQ86TL0 474 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 AEBP1Q8IUX7 1158 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 TMEM102Q8N9M5 508 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 BHLHE22Q8NFJ8 381 aaPredicted RBP7.04□□□□□ -1.28
LINC00342-201ENST00000412393 GPR152Q8TDT2 470 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 BSNDQ8WZ55 320 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 MISP3Q96FF7 219 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 STIM2Q9P246 746 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 SLC5A6Q9Y289 635 aa7.04□□□□□ -1.28
LINC00342-201ENST00000412393 LOC100289279A0A1B0GTE1 492 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 ERVV-2B6SEH9 535 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 CNGB1Q14028 1251 aaPredicted RBP7.03□□□□□ -1.28
LINC00342-201ENST00000412393 MAP7Q14244 749 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 OCLNQ16625 522 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 C1orf141Q5JVX7 400 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 ZNF648Q5T619 568 aaPredicted RBP7.03□□□□□ -1.28
LINC00342-201ENST00000412393 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 COL23A1Q86Y22 540 aaPredicted RBP7.03□□□□□ -1.28
LINC00342-201ENST00000412393 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 KDRP35968 1356 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 NPC1L1Q9UHC9 1359 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 ZNF831Q5JPB2 1677 aa7.03□□□□□ -1.28
LINC00342-201ENST00000412393 COL5A3P25940 1745 aaPredicted RBP7.02□□□□□ -1.29
LINC00342-201ENST00000412393 CCER2I3L3R5 266 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 CES1P23141 567 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 POLD1P28340 1107 aa7.02□□□□□ -1.29
LINC00342-201ENST00000412393 SOX4Q06945 474 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms