RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 EZH1Q92800 747 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-204ENST00000412061 MEGF10Q96KG7 1140 aa6.21□□□□□ -1.42
BRCA1-204ENST00000412061 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
BRCA1-204ENST00000412061 SLC6A18Q96N87 628 aa6.21□□□□□ -1.42
BRCA1-204ENST00000412061 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.21□□□□□ -1.42
BRCA1-204ENST00000412061 PCDH12Q9NPG4 1184 aa6.21□□□□□ -1.42
BRCA1-204ENST00000412061 B2RBV5 119 aa6.2□□□□□ -1.42
BRCA1-204ENST00000412061 TPD52L2O43399 206 aaKnown RBP6.2□□□□□ -1.42
BRCA1-204ENST00000412061 CLEC3AO75596 197 aa6.2□□□□□ -1.42
BRCA1-204ENST00000412061 UBOX5O94941 541 aa6.2□□□□□ -1.42
BRCA1-204ENST00000412061 MAP4P27816 1152 aaKnown RBP6.2□□□□□ -1.42
BRCA1-204ENST00000412061 SLC7A5Q01650 507 aa6.2□□□□□ -1.42
BRCA1-204ENST00000412061 GNPTABQ3T906 1256 aa6.2□□□□□ -1.42
BRCA1-204ENST00000412061 ZNF214Q9UL59 606 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-204ENST00000412061 DNAJC6O75061 913 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 PMS1P54277 932 aaKnown RBP6.19□□□□□ -1.42
BRCA1-204ENST00000412061 KIAA1211LQ6NV74 962 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 FAM20CQ8IXL6 584 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 TMEM192Q8IY95 271 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 ARMC10Q8N2F6 343 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 SMARCC1Q92922 1105 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-204ENST00000412061 MIPEPQ99797 713 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 KCNF1Q9H3M0 494 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 MYH16Q9H6N6 1097 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 LGR6Q9HBX8 967 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 SUCOQ9UBS9 1254 aaKnown RBP6.19□□□□□ -1.42
BRCA1-204ENST00000412061 PCDHB10Q9UN67 800 aa6.19□□□□□ -1.42
BRCA1-204ENST00000412061 FAM95CA0A1B0GW59 222 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 ENPP3O14638 875 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 DHX15O43143 795 aaKnown RBP6.18□□□□□ -1.42
BRCA1-204ENST00000412061 MAP4K4O95819 1239 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-204ENST00000412061 MTERF2Q49AM1 385 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 MRM1Q6IN84 353 aaKnown RBP6.18□□□□□ -1.42
BRCA1-204ENST00000412061 LETMD1Q6P1Q0 360 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 PAOXQ6QHF9 649 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 EEPD1Q7L9B9 569 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 ST13P5Q8NFI4 369 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-204ENST00000412061 PPP1R13LQ8WUF5 828 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 KLHL6Q8WZ60 621 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 RNPC3Q96LT9 517 aaKnown RBP6.18□□□□□ -1.42
BRCA1-204ENST00000412061 DNAJC7Q99615 494 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 SPC25Q9HBM1 224 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 CHPF2Q9P2E5 772 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 CEP131Q9UPN4 1083 aa6.18□□□□□ -1.42
BRCA1-204ENST00000412061 DYNC1LI2O43237 492 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-204ENST00000412061 ETV3P41162 512 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 DOC2BQ14184 412 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 NFKBIBQ15653 356 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 SEZ6L2Q6UXD5 910 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 DNAJB8Q8NHS0 232 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 GIMAP7Q8NHV1 300 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 ZNF669Q96BR6 464 aaPredicted RBP6.17□□□□□ -1.42
BRCA1-204ENST00000412061 EPN3Q9H201 632 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 PRDM10Q9NQV6 1147 aa6.17□□□□□ -1.42
BRCA1-204ENST00000412061 PPP1R12AO14974 1030 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-204ENST00000412061 SUSD5O60279 629 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 SLITRK5O94991 958 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 NAT2P11245 290 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 ZNF143P52747 638 aaPredicted RBP6.16□□□□□ -1.42
BRCA1-204ENST00000412061 RNF4P78317 190 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 PLEKHG6Q3KR16 790 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 HSP90AB2PQ58FF8 381 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 GORABQ5T7V8 394 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 TDRD10Q5VZ19 366 aaKnown RBP6.16□□□□□ -1.42
BRCA1-204ENST00000412061 BEND4Q6ZU67 534 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 PPFIBP1Q86W92 1011 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 CLEC10AQ8IUN9 316 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 SEMA6BQ9H3T3 888 aa6.16□□□□□ -1.42
BRCA1-204ENST00000412061 G3BP2Q9UN86 482 aaKnown RBP6.16□□□□□ -1.42
BRCA1-204ENST00000412061 C9IYK1 514 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 TP53P04637 393 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-204ENST00000412061 CDK5R2Q13319 367 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 CDH24Q86UP0 819 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 CCDC144CPQ8IYA2 1237 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 EXOC8Q8IYI6 725 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 RPUSD2Q8IZ73 545 aaKnown RBP6.15□□□□□ -1.43
BRCA1-204ENST00000412061 TOP6BLQ8N6T0 577 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 KREMEN1Q96MU8 473 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 FAM83CQ9BQN1 747 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 SSBP4Q9BWG4 385 aaPredicted RBP6.15□□□□□ -1.43
BRCA1-204ENST00000412061 MKRN2Q9H000 416 aaKnown RBP6.15□□□□□ -1.43
BRCA1-204ENST00000412061 IRF2BPLQ9H1B7 796 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 C1GALT1Q9NS00 363 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 FAM86C1Q9NVL1 165 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 FAN1Q9Y2M0 1017 aa6.15□□□□□ -1.43
BRCA1-204ENST00000412061 IQCA1LA6NCM1 817 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 PEX14O75381 377 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 CYP7A1P22680 504 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 SSRP1Q08945 709 aaKnown RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 PLEKHG4Q58EX7 1191 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 AXDND1Q5T1B0 1012 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 NBPF12Q5TAG4 269 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 HEATR6Q6AI08 1181 aaKnown RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 TMED8Q6PL24 325 aaPredicted RBP6.14□□□□□ -1.43
BRCA1-204ENST00000412061 SPATC1Q76KD6 591 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 LILRB2Q8N423 598 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 RIN3Q8TB24 985 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 SH3TC2Q8TF17 1288 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 RNF141Q8WVD5 230 aa6.14□□□□□ -1.43
BRCA1-204ENST00000412061 ZNF512BQ96KM6 892 aaPredicted RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms