RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 KRTAP9-9Q9BYP9 154 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 KRTAP9-4Q9BYQ2 154 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 BACH2Q9BYV9 841 aa8.02□□□□□ -1.13
HDAC9-205ENST00000411993 SRFP11831 508 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 RAC2P15153 192 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 EGR3Q06889 387 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 CLEC16AQ2KHT3 1053 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 GAB4Q2WGN9 574 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 LDLRAD1Q5T700 205 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 USP48Q86UV5 1035 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 KRTAP19-1Q8IUB9 90 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 NT5C1AQ9BXI3 368 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 ASCC2Q9H1I8 757 aaPredicted RBP8.01□□□□□ -1.13
HDAC9-205ENST00000411993 EHMT1Q9H9B1 1298 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 C19orf73Q9NVV2 129 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 TMEM59LQ9UK28 342 aa8.01□□□□□ -1.13
HDAC9-205ENST00000411993 DNAJC25-GNG10A0A024R161 153 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 RBM47A0AV96 593 aaKnown RBP8□□□□□ -1.13
HDAC9-205ENST00000411993 HK2P52789 917 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 CLCQ05315 142 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 TMEM67Q5HYA8 995 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 RALGPS1Q5JS13 557 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 FYB2Q5VWT5 728 aa8□□□□□ -1.13
HDAC9-205ENST00000411993 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
HDAC9-205ENST00000411993 SYTL4Q96C24 671 aaPredicted RBP8□□□□□ -1.13
HDAC9-205ENST00000411993 METTL5Q9NRN9 209 aaKnown RBP8□□□□□ -1.13
HDAC9-205ENST00000411993 LRRC10BA6NIK2 292 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 FARP2O94887 1054 aaPredicted RBP7.99□□□□□ -1.13
HDAC9-205ENST00000411993 UBOX5O94941 541 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 GLI1P08151 1106 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 POLR2BP30876 1174 aaKnown RBP7.99□□□□□ -1.13
HDAC9-205ENST00000411993 FANCCQ00597 558 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 MPZL3Q6UWV2 235 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.99□□□□□ -1.13
HDAC9-205ENST00000411993 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 PCDHA11Q9Y5I1 949 aa7.99□□□□□ -1.13
HDAC9-205ENST00000411993 LRRFIP1Q32MZ4 808 aaKnown RBP7.98□□□□□ -1.13
HDAC9-205ENST00000411993 ZNF648Q5T619 568 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-205ENST00000411993 CDCP2Q5VXM1 449 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 NLRC3Q7RTR2 1065 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 SLITRK4Q8IW52 837 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 RNF34Q969K3 372 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 ATG4CQ96DT6 458 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 EAF1Q96JC9 268 aaPredicted RBP7.98□□□□□ -1.13
HDAC9-205ENST00000411993 CNNM2Q9H8M5 875 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 PCDHGB7Q9Y5F8 929 aa7.98□□□□□ -1.13
HDAC9-205ENST00000411993 SHISA3A0PJX4 238 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 ZNF503-AS2A6NEH8 195 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 C8AP07357 584 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 RAD51AP2Q09MP3 1159 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 MLANAQ16655 118 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 ZNF394Q53GI3 561 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 ABHD4Q8TB40 342 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 LIN37Q96GY3 246 aaPredicted RBP7.97□□□□□ -1.13
HDAC9-205ENST00000411993 ADAMTS10Q9H324 1103 aa7.97□□□□□ -1.13
HDAC9-205ENST00000411993 CLEC3AO75596 197 aa7.96□□□□□ -1.14
HDAC9-205ENST00000411993 NMIQ13287 307 aaPredicted RBP7.96□□□□□ -1.14
HDAC9-205ENST00000411993 PKN1Q16512 942 aa7.96□□□□□ -1.14
HDAC9-205ENST00000411993 KSR1Q8IVT5 923 aa7.96□□□□□ -1.14
HDAC9-205ENST00000411993 SLC38A3Q99624 504 aa7.96□□□□□ -1.14
HDAC9-205ENST00000411993 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDAC9-205ENST00000411993 KRTAP4-8A0A0G2JLE6 195 aa7.95□□□□□ -1.14
HDAC9-205ENST00000411993 NBPF12Q5TAG4 269 aaPredicted RBP7.95□□□□□ -1.14
HDAC9-205ENST00000411993 MYLIPQ8WY64 445 aa7.95□□□□□ -1.14
HDAC9-205ENST00000411993 DHX38Q92620 1227 aaKnown RBP7.95□□□□□ -1.14
HDAC9-205ENST00000411993 VWCEQ96DN2 955 aa7.95□□□□□ -1.14
HDAC9-205ENST00000411993 ANTXR1Q9H6X2 564 aa7.95□□□□□ -1.14
HDAC9-205ENST00000411993 MEIS3P2A8K0S8 358 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-205ENST00000411993 SCAMP3O14828 347 aaKnown RBP7.94□□□□□ -1.14
HDAC9-205ENST00000411993 RECKO95980 971 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 NME1P15531 152 aaKnown RBP7.94□□□□□ -1.14
HDAC9-205ENST00000411993 CCNFP41002 786 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 ERVFC1P60507 584 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 TRIM26Q12899 539 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-205ENST00000411993 OXR1Q8N573 874 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 ZNF512BQ96KM6 892 aaPredicted RBP7.94□□□□□ -1.14
HDAC9-205ENST00000411993 FERD3LQ96RJ6 166 aa7.94□□□□□ -1.14
HDAC9-205ENST00000411993 HPXP02790 462 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 IMPDH2P12268 514 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 VAMP1P23763 118 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 NBPF9Q3BBW0 867 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 PDZD8Q8NEN9 1154 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 ENOX1Q8TC92 643 aaKnown RBP7.93□□□□□ -1.14
HDAC9-205ENST00000411993 SYTL5Q8TDW5 730 aaPredicted RBP7.93□□□□□ -1.14
HDAC9-205ENST00000411993 HDAC8Q9BY41 377 aa7.93□□□□□ -1.14
HDAC9-205ENST00000411993 MKRN2Q9H000 416 aaKnown RBP7.93□□□□□ -1.14
HDAC9-205ENST00000411993 SSU72P8A0A1W2PR75 194 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 TNFRSF10CO14798 259 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 ZGLP1P0C6A0 271 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 DUSP4Q13115 394 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 FBXW10Q5XX13 1052 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 PRR23BQ6ZRT6 265 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 TMC3Q7Z5M5 1100 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 FAM84AQ96KN4 292 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 SLC6A18Q96N87 628 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 ZNRF3Q9ULT6 936 aa7.92□□□□□ -1.14
HDAC9-205ENST00000411993 FITM1A5D6W6 292 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 FAM86C2PA6NEL3 165 aa7.91□□□□□ -1.14
HDAC9-205ENST00000411993 TRHRP34981 398 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms