RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 ANKRD24Q8TF21 1146 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 DCTN4Q9UJW0 460 aa4.83□□□□□ -1.64
HMGB3P2-201ENST00000411913 PSPNO60542 156 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 MAPK8P45983 427 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 TTBK2Q6IQ55 1244 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 SV2BQ7L1I2 683 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 DTWD2Q8NBA8 298 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 DNAJB8Q8NHS0 232 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 DACT3Q96B18 629 aaPredicted RBP4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 TTF2Q9UNY4 1162 aaKnown RBP4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 TACC3Q9Y6A5 838 aa4.82□□□□□ -1.64
HMGB3P2-201ENST00000411913 GFRA2O00451 464 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 TREHO43280 583 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 PDE4BQ07343 736 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 VMACQ2NL98 169 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 ZXDCQ2QGD7 858 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 SP8Q8IXZ3 490 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 SHISA4Q96DD7 197 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 MBD1Q9UIS9 605 aaPredicted RBP4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
HMGB3P2-201ENST00000411913 SLC22A31A6NKX4 558 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 USP17L7P0C7H9 530 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 MAPK1P28482 360 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 EPHB3P54753 998 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 SEPT6Q14141 434 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 MCATQ8IVS2 390 aaKnown RBP4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 FAM8A1Q9UBU6 413 aa4.8□□□□□ -1.64
HMGB3P2-201ENST00000411913 SOWAHDA6NJG2 315 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 N4BP3O15049 544 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 LRRN2O75325 713 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 TEKQ02763 1124 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 PLP2Q04941 152 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 SLC14A2Q15849 920 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 CLEC16AQ2KHT3 1053 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 SPATS1Q496A3 300 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 ALG1LQ6GMV1 187 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 CNKSR3Q6P9H4 555 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 SYT8Q8NBV8 401 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 TEPSINQ96N21 525 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 C12orf49Q9H741 205 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 EBF1Q9UH73 591 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 PCDHB5Q9Y5E4 795 aa4.79□□□□□ -1.64
HMGB3P2-201ENST00000411913 INSRRP14616 1297 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 RPL10P27635 214 aaKnown RBP4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 TNNI2P48788 182 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 RPS26P62854 115 aaKnown RBP4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ATP2B2Q01814 1243 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 OLFML2BQ68BL8 750 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 C14orf37Q86TY3 774 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 NLRX1Q86UT6 975 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 LINC01599Q8WXQ3 324 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ACSF2Q96CM8 615 aaPredicted RBP4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 SETDB2Q96T68 719 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ADAM7Q9H2U9 754 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 CNTD2Q9H8S5 307 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ZMYM5Q9UJ78 669 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ADAM30Q9UKF2 790 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ADAMTS20P59510 1910 aa4.78□□□□□ -1.64
HMGB3P2-201ENST00000411913 ZC3H12DA2A288 527 aaKnown RBP4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 HRKO00198 91 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 VIPR1P32241 457 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 CCDC85BQ15834 202 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 CYB5D2Q8WUJ1 264 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 RNF141Q8WVD5 230 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 BDH2Q9BUT1 245 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 MIR1-1HGQ9H1L0 117 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 WWC3Q9ULE0 1092 aa4.77□□□□□ -1.65
HMGB3P2-201ENST00000411913 USP2O75604 605 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 SDHBP21912 280 aa4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 YARSP54577 528 aaKnown RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 PUM1Q14671 1186 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 DIEXFQ68CQ4 756 aaKnown RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 CEP128Q6ZU80 1094 aa4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 FAM13CQ8NE31 585 aa4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 ASCC2Q9H1I8 757 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 EPB41L4AQ9HCS5 686 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 LUC7LQ9NQ29 371 aaKnown RBP4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 CRTAC1Q9NQ79 661 aa4.76□□□□□ -1.65
HMGB3P2-201ENST00000411913 NOTOA8MTQ0 251 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 UPK3BL1B0FP48 263 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 UPK3BL2E5RIL1 263 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 ABLIM1O14639 778 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 PLCG1P19174 1290 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 CHMP4BP1P59074 171 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 MAP3K11Q16584 847 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 TSNAXIP1Q2TAA8 658 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 WAPLQ7Z5K2 1190 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 FRMD5Q7Z6J6 570 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 MZB1Q8WU39 189 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 JARID2Q92833 1246 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 PWWP2AQ96N64 755 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 GPR20Q99678 358 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 G6PC3Q9BUM1 346 aa4.75□□□□□ -1.65
HMGB3P2-201ENST00000411913 SSU72P8A0A1W2PR75 194 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 RBM47A0AV96 593 aaKnown RBP4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 SHISA3A0PJX4 238 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 IRS4O14654 1257 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 NRDCO43847 1150 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 CILPO75339 1184 aa4.74□□□□□ -1.65
HMGB3P2-201ENST00000411913 CDR1P51861 262 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms