RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RHPN1Q8TCX5 695 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SDR42E1Q8WUS8 393 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PRKAG2Q9UGJ0 569 aa17.26■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ZNF532Q9HCE3 1301 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 GOLIM4O00461 696 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 IGHA2P01877 340 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 CYBAP13498 195 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ERCC3P19447 782 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 RTP1P59025 263 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 GJC2Q5T442 439 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ARRDC4Q8NCT1 418 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PANK1Q8TE04 598 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SPATC1LQ9H0A9 340 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 BCL11AQ9H165 835 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 DCP1AQ9NPI6 582 aaPredicted RBP17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 MYH8P13535 1937 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 RLFQ13129 1914 aa17.25■□□□□ 0.35
HLA-DQB2-229ENST00000411527 APBB1O00213 710 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 CYP2D6P10635 497 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PLS1Q14651 629 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 KIAA1755Q5JYT7 1200 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ANO1Q5XXA6 986 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 OLFML2BQ68BL8 750 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 TMEM179Q6ZVK1 233 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 LCORLQ8N3X6 602 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SLC44A5Q8NCS7 719 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SHCBP1Q8NEM2 672 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ATP11BQ9Y2G3 1177 aa17.24■□□□□ 0.35
HLA-DQB2-229ENST00000411527 TCRBV5S4A2TA0A5A2 114 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 POTEB2H3BUK9 544 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 COBLO75128 1261 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 MYCNP04198 464 aaPredicted RBP17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 DSG3P32926 999 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 NCAPG2Q86XI2 1143 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 CLASRPQ8N2M8 674 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ARMT1Q9H993 441 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SLC5A4Q9NY91 659 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ZNF236Q9UL36 1845 aa17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ZNFX1Q9P2E3 1918 aaKnown RBP17.23■□□□□ 0.35
HLA-DQB2-229ENST00000411527 A0A0G2JMZ2 1700 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SEPT4O43236 478 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 FLOT1O75955 427 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PRAMEF19Q5SWL8 479 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 FAM109BQ6ICB4 259 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SAMD1Q6SPF0 538 aaPredicted RBP17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SLC39A5Q6ZMH5 540 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 CLEC10AQ8IUN9 316 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SIAH1Q8IUQ4 282 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 MROH8Q9H579 483 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ARHGEF10LQ9HCE6 1279 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 DNAH12Q6ZR08 3092 aa17.22■□□□□ 0.35
HLA-DQB2-229ENST00000411527 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 PRKAB2O43741 272 aa17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
HLA-DQB2-229ENST00000411527 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 AKR1B1P15121 316 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ICA1Q05084 483 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SLFNL1Q499Z3 407 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ABRAQ8N0Z2 381 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 GUCD1Q96NT3 240 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SH2D4AQ9H788 454 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PRDM5Q9NQX1 630 aaPredicted RBP17.2■□□□□ 0.34
HLA-DQB2-229ENST00000411527 MBD4O95243 580 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 FCER1AP12319 257 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ADCYAP1R1P41586 468 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 RPAP2Q8IXW5 612 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 FERMT2Q96AC1 680 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 MAML3Q96JK9 1138 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ATP8A2Q9NTI2 1148 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PAG1Q9NWQ8 432 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SMCHD1A6NHR9 2005 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 COL11A1P12107 1806 aaPredicted RBP17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 PARP14Q460N5 1801 aa17.19■□□□□ 0.34
HLA-DQB2-229ENST00000411527 CYP2D7A0A087X1C5 515 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SMIM22K7EJ46 135 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 WDR46O15213 610 aaKnown RBP17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 ADD2P35612 726 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 CDK8P49336 464 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 LRRC41Q15345 812 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 SHHQ15465 462 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 TRIM60Q495X7 471 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 C12orf60Q5U649 245 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 CCDC17Q96LX7 622 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 BOLA2Q9H3K6 86 aa17.18■□□□□ 0.34
HLA-DQB2-229ENST00000411527 A0A0C4DFX4 3053 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 USP17L12C9JPN9 530 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 USP17L21D6R901 530 aa17.17■□□□□ 0.34
HLA-DQB2-229ENST00000411527 HMMRO75330 724 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms