RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TRPV1Q8NER1 839 aa20.22■□□□□ 0.83
MRPL55-220ENST00000411464 DNAJC2Q99543 621 aaKnown RBP20.22■□□□□ 0.83
MRPL55-220ENST00000411464 SPATC1LQ9H0A9 340 aa20.22■□□□□ 0.83
MRPL55-220ENST00000411464 SLC5A4Q9NY91 659 aa20.22■□□□□ 0.83
MRPL55-220ENST00000411464 FOCADQ5VW36 1801 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 GOLIM4O00461 696 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 IFIT2P09913 472 aaKnown RBP20.21■□□□□ 0.83
MRPL55-220ENST00000411464 CYBAP13498 195 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 ERCC3P19447 782 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 PLS1Q14651 629 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 MB21D1Q8N884 522 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 SHCBP1Q8NEM2 672 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 SDR42E1Q8WUS8 393 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 DCP1AQ9NPI6 582 aaPredicted RBP20.21■□□□□ 0.83
MRPL55-220ENST00000411464 SWAP70Q9UH65 585 aa20.21■□□□□ 0.83
MRPL55-220ENST00000411464 APBB1O00213 710 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 IGHA2P01877 340 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 EVX2Q03828 476 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 GJC2Q5T442 439 aaPredicted RBP20.2■□□□□ 0.82
MRPL55-220ENST00000411464 PANK1Q8TE04 598 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.2■□□□□ 0.82
MRPL55-220ENST00000411464 KIF1BPQ96EK5 621 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 MROH8Q9H579 483 aa20.2■□□□□ 0.82
MRPL55-220ENST00000411464 KBTBD13C9JR72 458 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
MRPL55-220ENST00000411464 DSG3P32926 999 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 RTP1P59025 263 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 LCORLQ8N3X6 602 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 SH2D4AQ9H788 454 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 ARHGEF10LQ9HCE6 1279 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 ATP11BQ9Y2G3 1177 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 CDK5RAP2Q96SN8 1893 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 DNAH12Q6ZR08 3092 aa20.19■□□□□ 0.82
MRPL55-220ENST00000411464 TCRBV5S4A2TA0A5A2 114 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 POTEB2H3BUK9 544 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 SEPT4O43236 478 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 COBLO75128 1261 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 FLOT1O75955 427 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 CYP2D6P10635 497 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 FAM109BQ6ICB4 259 aaPredicted RBP20.18■□□□□ 0.82
MRPL55-220ENST00000411464 NCAPG2Q86XI2 1143 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 ABRAQ8N0Z2 381 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 SPICE1Q8N0Z3 855 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 SLC44A5Q8NCS7 719 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 DYNLL2Q96FJ2 89 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 ARMT1Q9H993 441 aa20.18■□□□□ 0.82
MRPL55-220ENST00000411464 HMMRO75330 724 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 MS4A1P11836 297 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 ICA1Q05084 483 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 KIAA1755Q5JYT7 1200 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 ANO1Q5XXA6 986 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
MRPL55-220ENST00000411464 SLC39A5Q6ZMH5 540 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 AMOTL1Q8IY63 956 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 ATP8A2Q9NTI2 1148 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 TMX2Q9Y320 296 aa20.17■□□□□ 0.82
MRPL55-220ENST00000411464 MYO5AQ9Y4I1 1855 aaKnown RBP20.17■□□□□ 0.82
MRPL55-220ENST00000411464 MYH1P12882 1939 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 FCER1AP12319 257 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 SIAH1Q8IUQ4 282 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 RPAP2Q8IXW5 612 aaPredicted RBP20.16■□□□□ 0.82
MRPL55-220ENST00000411464 ATG4CQ96DT6 458 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 CCDC17Q96LX7 622 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 PAG1Q9NWQ8 432 aa20.16■□□□□ 0.82
MRPL55-220ENST00000411464 PRKAB2O43741 272 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 MBD4O95243 580 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 AKR1B1P15121 316 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 PRAMEF19Q5SWL8 479 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 DDRGK1Q96HY6 314 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.82
MRPL55-220ENST00000411464 VCPKMTQ9H867 229 aa20.15■□□□□ 0.82
MRPL55-220ENST00000411464 PRDM5Q9NQX1 630 aaPredicted RBP20.15■□□□□ 0.82
MRPL55-220ENST00000411464 WDR46O15213 610 aaKnown RBP20.14■□□□□ 0.81
MRPL55-220ENST00000411464 RAB11FIP3O75154 756 aa20.14■□□□□ 0.81
MRPL55-220ENST00000411464 SLC25A27O95847 323 aa20.14■□□□□ 0.81
MRPL55-220ENST00000411464 CLEC10AQ8IUN9 316 aa20.14■□□□□ 0.81
MRPL55-220ENST00000411464 MAML3Q96JK9 1138 aa20.14■□□□□ 0.81
MRPL55-220ENST00000411464 BOLA2Q9H3K6 86 aa20.14■□□□□ 0.81
MRPL55-220ENST00000411464 ADD2P35612 726 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 ADCYAP1R1P41586 468 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 CDK8P49336 464 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 TRIM60Q495X7 471 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 ZNF697Q5TEC3 545 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 C12orf60Q5U649 245 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 FAM161BQ96MY7 647 aa20.13■□□□□ 0.81
MRPL55-220ENST00000411464 USP17L12C9JPN9 530 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 USP17L21D6R901 530 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 TMEM132BQ14DG7 1078 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 LRRC41Q15345 812 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 SHHQ15465 462 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 SLFNL1Q499Z3 407 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 FERMT2Q96AC1 680 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 GUCD1Q96NT3 240 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 MMP19Q99542 508 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 KANSL2Q9H9L4 492 aa20.12■□□□□ 0.81
MRPL55-220ENST00000411464 LAMA2P24043 3122 aaKnown RBP20.11■□□□□ 0.81
MRPL55-220ENST00000411464 CYP2D7A0A087X1C5 515 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 RAD21O60216 631 aa20.11■□□□□ 0.81
MRPL55-220ENST00000411464 EEF2P13639 858 aaKnown RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms