RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TIGD5Q53EQ6 642 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PRPF40BQ6NWY9 871 aaKnown RBP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 DTHD1Q6ZMT9 781 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CDC37L1Q7L3B6 337 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ARMCX6Q7L4S7 300 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 LILRA2Q8N149 483 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SPATA32Q96LK8 384 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 C8orf37Q96NL8 207 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SP110Q9HB58 689 aa4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 LUC7LQ9NQ29 371 aaKnown RBP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TTF2Q9UNY4 1162 aaKnown RBP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 YBX2Q9Y2T7 364 aaKnown RBP4.05□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SLITRK5O94991 958 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 RECKO95980 971 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ESR1P03372 595 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ERCC5P28715 1186 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TAF1CQ15572 869 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 RPS26P11Q5JNZ5 115 aaPredicted RBP4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 C22orf34Q6ZV56 151 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 VPS37DQ86XT2 251 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CREG2Q8IUH2 290 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 OXR1Q8N573 874 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PDZD8Q8NEN9 1154 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 MRIQ9BWK5 157 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 BCO2Q9BYV7 579 aa4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CWC22Q9HCG8 908 aaKnown RBP4.04□□□□□ -1.76
RNU6-1140P-201ENST00000410517 CILPO75339 1184 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 USP17L7P0C7H9 530 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 NTF4P34130 210 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 TMPRSS7Q7RTY8 843 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 PDZD3Q86UT5 571 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ANKRD24Q8TF21 1146 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ZNF428Q96B54 188 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 ACSBG1Q96GR2 724 aa4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 NOC4LQ9BVI4 516 aaKnown RBP4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 SCAND2PQ9GZW5 306 aaPredicted RBP4.03□□□□□ -1.76
RNU6-1140P-201ENST00000410517 UNCXA6NJT0 531 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MAGEA10P43363 369 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EPHB3P54753 998 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SRSF3P84103 164 aaKnown RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 USPL1Q5W0Q7 1092 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MAP1SQ66K74 1059 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SV2BQ7L1I2 683 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 RELL1Q8IUW5 271 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GPBAR1Q8TDU6 330 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EMILIN2Q9BXX0 1053 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 BACH2Q9BYV9 841 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TGIF2Q9GZN2 237 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SLITRK6Q9H5Y7 841 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EPB41L4AQ9HCS5 686 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SIRT5Q9NXA8 310 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 KIAA1522Q9P206 1035 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MBD1Q9UIS9 605 aaPredicted RBP4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 WWC3Q9ULE0 1092 aa4.02□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ERCC6Q03468 1493 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TMEM238LA0A1B0GVL6 79 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FITM1A5D6W6 292 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 WASH4PA8MWX3 477 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 DCDC2CA8MYV0 355 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 LRIG2O94898 1065 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FCGRTP55899 365 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GRM2Q14416 872 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 LRRC14Q15048 493 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CRB2Q5IJ48 1285 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 UBXN11Q5T124 520 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CNKSR3Q6P9H4 555 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 USP48Q86UV5 1035 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 C12orf40Q86WS4 652 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZNF654Q8IZM8 581 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 STK35Q8TDR2 534 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 EPS8L3Q8TE67 593 aaKnown RBP4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 PPP1R13LQ8WUF5 828 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 MIPEPQ99797 713 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CAPN10Q9HC96 672 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ABCB6Q9NP58 842 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GPN3Q9UHW5 284 aaPredicted RBP4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GGT7Q9UJ14 662 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GPR160Q9UJ42 338 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CNOT11Q9UKZ1 510 aaKnown RBP4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 AKAP2Q9Y2D5 859 aa4.01□□□□□ -1.77
RNU6-1140P-201ENST00000410517 OR14I1A6ND48 311 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 RBAK-RBAKDNI3L0D1 243 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FANCGO15287 622 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ZGLP1P0C6A0 271 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GDF5P43026 501 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 GALK1P51570 392 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TNK2Q07912 1038 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 CCDC85BQ15834 202 aaPredicted RBP4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SCARA3Q6AZY7 606 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 NXPE4Q6UWF7 544 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SULF2Q8IWU5 870 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 LINC01356Q8N9X3 169 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 KCT2Q8NC54 265 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 FAM161BQ96MY7 647 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 TMEM39AQ9NV64 488 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 USP31Q70CQ4 1352 aa4□□□□□ -1.77
RNU6-1140P-201ENST00000410517 N4BP3O15049 544 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 SLPIP03973 132 aa3.99□□□□□ -1.77
RNU6-1140P-201ENST00000410517 ARNTP27540 789 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms