RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 IQCA1Q86XH1 822 aa18.91■□□□□ 0.62
PDK1-203ENST00000410055 SMYD4Q8IYR2 804 aaPredicted RBP18.91■□□□□ 0.62
PDK1-203ENST00000410055 FOXP1Q9H334 677 aaPredicted RBP18.91■□□□□ 0.62
PDK1-203ENST00000410055 SAMSN1Q9NSI8 373 aaKnown RBP18.91■□□□□ 0.62
PDK1-203ENST00000410055 ADAM21Q9UKJ8 722 aa18.91■□□□□ 0.62
PDK1-203ENST00000410055 STK36Q9NRP7 1315 aa18.91■□□□□ 0.62
PDK1-203ENST00000410055 TAF1P21675 1872 aa18.91■□□□□ 0.62
PDK1-203ENST00000410055 WNT7AO00755 349 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 ZRANB2O95218 330 aaKnown RBP eCLIP18.9■□□□□ 0.62
PDK1-203ENST00000410055 GSCP56915 257 aaPredicted RBP18.9■□□□□ 0.62
PDK1-203ENST00000410055 MAP2K1Q02750 393 aaPredicted RBP18.9■□□□□ 0.62
PDK1-203ENST00000410055 BIRC2Q13490 618 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 SHISA4Q96DD7 197 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 MINPP1Q9UNW1 487 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 CBFA2T2O43439 604 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 XBP1P17861 261 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 ACTN2P35609 894 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 LEKR1Q6ZMV7 388 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 PTF1AQ7RTS3 328 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 RPAINQ86UA6 219 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 CPLX3Q8WVH0 158 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 FAM84BQ96KN1 310 aaPredicted RBP18.9■□□□□ 0.62
PDK1-203ENST00000410055 MED4Q9NPJ6 270 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 CYP2D6P10635 497 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
PDK1-203ENST00000410055 TRIM75PA6NK02 468 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 FAM98CQ17RN3 349 aaKnown RBP18.89■□□□□ 0.61
PDK1-203ENST00000410055 HOMEZQ8IX15 550 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
PDK1-203ENST00000410055 VWA3AA6NCI4 1184 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 PRDX5P30044 214 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 SLC51AQ86UW1 340 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 RIOK1Q9BRS2 568 aaKnown RBP18.89■□□□□ 0.61
PDK1-203ENST00000410055 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
PDK1-203ENST00000410055 SPATA31A1Q5TZJ5 1347 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 KIF1CO43896 1103 aaKnown RBP18.88■□□□□ 0.61
PDK1-203ENST00000410055 SCP2P22307 547 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 SEC23AQ15436 765 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 ARGLU1Q9NWB6 273 aaPredicted RBP18.88■□□□□ 0.61
PDK1-203ENST00000410055 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 VEGFAP15692 232 aaPredicted RBP18.88■□□□□ 0.61
PDK1-203ENST00000410055 TBC1D9BQ66K14 1250 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 ZNF384Q8TF68 577 aa18.88■□□□□ 0.61
PDK1-203ENST00000410055 CALR3Q96L12 384 aaKnown RBP18.88■□□□□ 0.61
PDK1-203ENST00000410055 KRT2P35908 639 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 MNAT1P51948 309 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 MDM2Q00987 491 aaPredicted RBP18.87■□□□□ 0.61
PDK1-203ENST00000410055 MNS1Q8NEH6 495 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 CEP131Q9UPN4 1083 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 SH3BP1Q9Y3L3 701 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 ANKRD36CQ5JPF3 1778 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 A0A087X0B3 334 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 URI1O94763 535 aaPredicted RBP18.87■□□□□ 0.61
PDK1-203ENST00000410055 PKN1Q16512 942 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 LINC00116Q8NCU8 138 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 PPM1EQ8WY54 764 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 UBXN4Q92575 508 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 INTS13Q9NVM9 706 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 SRPRBQ9Y5M8 271 aaKnown RBP18.87■□□□□ 0.61
PDK1-203ENST00000410055 CDC25AP30304 524 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 MECOMQ03112 1051 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 VSTM4Q8IW00 320 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 COL4A1P02462 1669 aa18.87■□□□□ 0.61
PDK1-203ENST00000410055 MYH14Q7Z406 1995 aaKnown RBP18.86■□□□□ 0.61
PDK1-203ENST00000410055 BAZ2AQ9UIF9 1905 aaKnown RBP18.86■□□□□ 0.61
PDK1-203ENST00000410055 SYMPKQ92797 1274 aaKnown RBP18.86■□□□□ 0.61
PDK1-203ENST00000410055 TSPY2A6NKD2 308 aa18.86■□□□□ 0.61
PDK1-203ENST00000410055 MMS22LQ6ZRQ5 1243 aa18.86■□□□□ 0.61
PDK1-203ENST00000410055 PIK3AP1Q6ZUJ8 805 aa18.86■□□□□ 0.61
PDK1-203ENST00000410055 CEP120Q8N960 986 aa18.86■□□□□ 0.61
PDK1-203ENST00000410055 RNF26Q9BY78 433 aaPredicted RBP18.86■□□□□ 0.61
PDK1-203ENST00000410055 BLZF1Q9H2G9 400 aa18.86■□□□□ 0.61
PDK1-203ENST00000410055 MCM7P33993 719 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 NLRP5P59047 1200 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 NBPF5PQ86XG9 351 aaPredicted RBP18.85■□□□□ 0.61
PDK1-203ENST00000410055 MICALL1Q8N3F8 863 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 CTCFLQ8NI51 663 aaPredicted RBP18.85■□□□□ 0.61
PDK1-203ENST00000410055 DESI2Q9BSY9 194 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 RTL9Q8NET4 1388 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 CHD4Q14839 1912 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 TXNRD3Q86VQ6 643 aa18.85■□□□□ 0.61
PDK1-203ENST00000410055 BSDC1Q9NW68 430 aaPredicted RBP18.85■□□□□ 0.61
PDK1-203ENST00000410055 FAM237AA0A1B0GTK4 181 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 MCM9Q9NXL9 1143 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 DOT1LQ8TEK3 1739 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
PDK1-203ENST00000410055 TBC1D8O95759 1140 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 RPS8P62241 208 aaKnown RBP18.84■□□□□ 0.61
PDK1-203ENST00000410055 PTGDRQ13258 359 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 MAPK8IP1Q9UQF2 711 aa18.84■□□□□ 0.61
PDK1-203ENST00000410055 COL1A1P02452 1464 aaPredicted RBP18.84■□□□□ 0.61
PDK1-203ENST00000410055 SRBD1Q8N5C6 995 aaKnown RBP18.84■□□□□ 0.61
PDK1-203ENST00000410055 PSDA5PKW4 1024 aaPredicted RBP18.83■□□□□ 0.61
PDK1-203ENST00000410055 ADAMTS3O15072 1205 aa18.83■□□□□ 0.61
PDK1-203ENST00000410055 HIBADHP31937 336 aaKnown RBP18.83■□□□□ 0.61
PDK1-203ENST00000410055 TROAPQ12815 778 aa18.83■□□□□ 0.61
PDK1-203ENST00000410055 MLKLQ8NB16 471 aa18.83■□□□□ 0.61
PDK1-203ENST00000410055 NLRP3Q96P20 1036 aa18.83■□□□□ 0.61
PDK1-203ENST00000410055 MED15Q96RN5 788 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms