RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 CLIP2Q9UDT6 1046 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 TAF6LQ9Y6J9 622 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 ADGRA2Q96PE1 1338 aa17.45■□□□□ 0.38
SUMO1-207ENST00000409498 B4E1Z4 1266 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 TLR2O60603 784 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 EIF5BO60841 1220 aaKnown RBP17.44■□□□□ 0.38
SUMO1-207ENST00000409498 KDM4AO75164 1064 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 HSPA8P11142 646 aaKnown RBP17.44■□□□□ 0.38
SUMO1-207ENST00000409498 HSPA4P34932 840 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 CTCFP49711 727 aaPredicted RBP17.44■□□□□ 0.38
SUMO1-207ENST00000409498 CRHR2Q13324 411 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 TAF1CQ15572 869 aaPredicted RBP17.44■□□□□ 0.38
SUMO1-207ENST00000409498 KIAA1755Q5JYT7 1200 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 RNF20Q5VTR2 975 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 DGKHQ86XP1 1220 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 GMCL1P1Q8NEA9 526 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 NCOA7Q8NI08 942 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 PARK7Q99497 189 aaKnown RBP17.44■□□□□ 0.38
SUMO1-207ENST00000409498 PNMA3Q9UL41 463 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 PCNTO95613 3336 aa17.44■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L15C9J2P7 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L13C9JLJ4 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L11C9JVI0 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L18D6R9N7 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L22D6RA61 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L17D6RBQ6 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L19D6RCP7 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L20D6RJB6 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 WDR46O15213 610 aaKnown RBP17.43■□□□□ 0.38
SUMO1-207ENST00000409498 NMT2O60551 498 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 TBC1D8O95759 1140 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 VCAM1P19320 739 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP17L24Q0WX57 530 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 TRDNQ13061 729 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 RCSD1Q6JBY9 416 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 CATSPERGQ6ZRH7 1159 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 IQCA1Q86XH1 822 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 MTA3Q9BTC8 594 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 R3HDMLQ9H3Y0 253 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 GOPCQ9HD26 462 aa17.43■□□□□ 0.38
SUMO1-207ENST00000409498 F5H6K3 240 aa17.42■□□□□ 0.38
SUMO1-207ENST00000409498 OSBPP22059 807 aa17.42■□□□□ 0.38
SUMO1-207ENST00000409498 KLRC3Q07444 240 aa17.42■□□□□ 0.38
SUMO1-207ENST00000409498 ZYXQ15942 572 aaKnown RBP17.42■□□□□ 0.38
SUMO1-207ENST00000409498 C17orf99Q6UX52 265 aa17.42■□□□□ 0.38
SUMO1-207ENST00000409498 LBX2Q6XYB7 198 aa17.42■□□□□ 0.38
SUMO1-207ENST00000409498 MB21D2Q8IYB1 491 aaPredicted RBP17.42■□□□□ 0.38
SUMO1-207ENST00000409498 GPR25O00155 361 aa17.41■□□□□ 0.38
SUMO1-207ENST00000409498 TOP1P11387 765 aaKnown RBP17.41■□□□□ 0.38
SUMO1-207ENST00000409498 ATP2B2Q01814 1243 aa17.41■□□□□ 0.38
SUMO1-207ENST00000409498 ZSCAN10Q96SZ4 725 aaPredicted RBP17.41■□□□□ 0.38
SUMO1-207ENST00000409498 TMEM47Q9BQJ4 181 aa17.41■□□□□ 0.38
SUMO1-207ENST00000409498 ASCC2Q9H1I8 757 aaPredicted RBP17.41■□□□□ 0.38
SUMO1-207ENST00000409498 STX8Q9UNK0 236 aa17.41■□□□□ 0.38
SUMO1-207ENST00000409498 RLFQ13129 1914 aa17.41■□□□□ 0.38
SUMO1-207ENST00000409498 NDUFB10O96000 172 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 CYP2C8P10632 490 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 BCRP11274 1271 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 KRT32Q14532 448 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 SEC23AQ15436 765 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 CYB5R4Q7L1T6 521 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 RALYLQ86SE5 291 aaKnown RBP17.4■□□□□ 0.38
SUMO1-207ENST00000409498 RASEFQ8IZ41 740 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 GTF3C2Q8WUA4 911 aaPredicted RBP17.4■□□□□ 0.38
SUMO1-207ENST00000409498 RPAP3Q9H6T3 665 aaPredicted RBP17.4■□□□□ 0.38
SUMO1-207ENST00000409498 PRDM10Q9NQV6 1147 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 MYPNQ86TC9 1320 aa17.4■□□□□ 0.38
SUMO1-207ENST00000409498 ZKSCAN1P17029 563 aaPredicted RBP17.39■□□□□ 0.37
SUMO1-207ENST00000409498 GCLCP48506 637 aaPredicted RBP17.39■□□□□ 0.37
SUMO1-207ENST00000409498 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
SUMO1-207ENST00000409498 ENAHQ8N8S7 591 aaPredicted RBP17.39■□□□□ 0.37
SUMO1-207ENST00000409498 GMCL1Q96IK5 515 aa17.39■□□□□ 0.37
SUMO1-207ENST00000409498 P2RX7Q99572 595 aaKnown RBP17.39■□□□□ 0.37
SUMO1-207ENST00000409498 PARP14Q460N5 1801 aa17.39■□□□□ 0.37
SUMO1-207ENST00000409498 PLA2G6O60733 806 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 LBX1P52954 281 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 ANTXR2P58335 489 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 HERVK_113P62684 666 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 IRX3P78415 501 aaPredicted RBP17.38■□□□□ 0.37
SUMO1-207ENST00000409498 COG2Q14746 738 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 SLFN13Q68D06 897 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 SPICE1Q8N0Z3 855 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 LRRC47Q8N1G4 583 aaKnown RBP17.38■□□□□ 0.37
SUMO1-207ENST00000409498 ZKSCAN3Q9BRR0 538 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 HOXC10Q9NYD6 342 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 TSKSQ9UJT2 592 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 ADAMTS5Q9UNA0 930 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 TNKSO95271 1327 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 WDR19Q8NEZ3 1342 aa17.38■□□□□ 0.37
SUMO1-207ENST00000409498 FKTNO75072 461 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 DSG3P32926 999 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 MCM5P33992 734 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 POTEEQ6S8J3 1075 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 IGDCC4Q8TDY8 1250 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 ZNF296Q8WUU4 475 aaPredicted RBP17.37■□□□□ 0.37
SUMO1-207ENST00000409498 IL17RAQ96F46 866 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 NEK1Q96PY6 1258 aa17.37■□□□□ 0.37
SUMO1-207ENST00000409498 UBAC1Q9BSL1 405 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms