RNA–Protein interactions for RNA: ENST00000409432.7

PPM1B-205, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPM1B, Length 3,025 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-205ENST00000409432 COL1A1P02452 1464 aaPredicted RBP17.05■□□□□ 0.32
PPM1B-205ENST00000409432 TROAPQ12815 778 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 TMTC2Q8N394 836 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 C8orf37Q96NL8 207 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 VPS16Q9H269 839 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 CTNND2Q9UQB3 1225 aa17.05■□□□□ 0.32
PPM1B-205ENST00000409432 BAZ2AQ9UIF9 1905 aaKnown RBP17.04■□□□□ 0.32
PPM1B-205ENST00000409432 PP2D1A8MPX8 630 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 SLC44A5Q8NCS7 719 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 FAM53CQ9NYF3 392 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 PLEKHG2Q9H7P9 1386 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 UTRNP46939 3433 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 ABL1P00519 1130 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 XBP1P17861 261 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 RBL2Q08999 1139 aa17.04■□□□□ 0.32
PPM1B-205ENST00000409432 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
PPM1B-205ENST00000409432 LRP6O75581 1613 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 TULP2O00295 520 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 SASH3O75995 380 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 DIXDC1Q155Q3 683 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 MYH3P11055 1940 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 FAM237AA0A1B0GTK4 181 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 ZSCAN26Q16670 478 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 STAG2Q8N3U4 1231 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 MLKLQ8NB16 471 aa17.03■□□□□ 0.32
PPM1B-205ENST00000409432 CTCFLQ8NI51 663 aaPredicted RBP17.03■□□□□ 0.32
PPM1B-205ENST00000409432 FUT2Q10981 343 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 CUL4BQ13620 913 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 DHX8Q14562 1220 aaKnown RBP17.02■□□□□ 0.32
PPM1B-205ENST00000409432 IGSF22Q8N9C0 903 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 RNF26Q9BY78 433 aaPredicted RBP17.02■□□□□ 0.32
PPM1B-205ENST00000409432 SAP30BPQ9UHR5 308 aaKnown RBP17.02■□□□□ 0.32
PPM1B-205ENST00000409432 CEP131Q9UPN4 1083 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 ZNF18P17022 549 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.32
PPM1B-205ENST00000409432 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 AMIGO3Q86WK7 504 aa17.02■□□□□ 0.32
PPM1B-205ENST00000409432 USP17L3A6NCW0 530 aa17.02■□□□□ 0.31
PPM1B-205ENST00000409432 USP17L4A6NCW7 530 aa17.02■□□□□ 0.31
PPM1B-205ENST00000409432 SMC1AQ14683 1233 aaKnown RBP17.02■□□□□ 0.31
PPM1B-205ENST00000409432 USP17L1Q7RTZ2 530 aa17.02■□□□□ 0.31
PPM1B-205ENST00000409432 CCDC12Q8WUD4 166 aaPredicted RBP17.02■□□□□ 0.31
PPM1B-205ENST00000409432 L2HGDHQ9H9P8 463 aa17.02■□□□□ 0.31
PPM1B-205ENST00000409432 DCP1AQ9NPI6 582 aaPredicted RBP17.02■□□□□ 0.31
PPM1B-205ENST00000409432 PUF60Q9UHX1 559 aaKnown RBP17.02■□□□□ 0.31
PPM1B-205ENST00000409432 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.31
PPM1B-205ENST00000409432 SYNRGQ9UMZ2 1314 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 KIF2AO00139 706 aaPredicted RBP17.01■□□□□ 0.31
PPM1B-205ENST00000409432 ARHGAP6O43182 974 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 CASQ1P31415 396 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 CASP14P31944 242 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 CCDC93Q567U6 631 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 ENOX1Q8TC92 643 aaKnown RBP17.01■□□□□ 0.31
PPM1B-205ENST00000409432 NSUN4Q96CB9 384 aaKnown RBP17.01■□□□□ 0.31
PPM1B-205ENST00000409432 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 GDAQ9Y2T3 454 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 ERCC3P19447 782 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 PLCD1P51178 756 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 MCM6Q14566 821 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 GRIK5Q16478 980 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 IL17AQ16552 155 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 NBPF5PQ86XG9 351 aaPredicted RBP17.01■□□□□ 0.31
PPM1B-205ENST00000409432 TAB2Q9NYJ8 693 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
PPM1B-205ENST00000409432 NPY5RQ15761 445 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 RAD9BQ6WBX8 426 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 UIMC1Q96RL1 719 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 TFR2Q9UP52 801 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
PPM1B-205ENST00000409432 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
PPM1B-205ENST00000409432 RPS8P62241 208 aaKnown RBP17■□□□□ 0.31
PPM1B-205ENST00000409432 TFAP4Q01664 338 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 PPFIBP1Q86W92 1011 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 VAT1LQ9HCJ6 419 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
PPM1B-205ENST00000409432 TRIM49BA6NDI0 452 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 PHACTR2O75167 634 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 HIBADHP31937 336 aaKnown RBP16.99■□□□□ 0.31
PPM1B-205ENST00000409432 TMTC3Q6ZXV5 915 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 ACRBPQ8NEB7 543 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 MTRQ99707 1265 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 RTL9Q8NET4 1388 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 FXR1P51114 621 aaKnown RBP eCLIP16.99■□□□□ 0.31
PPM1B-205ENST00000409432 GPS2Q13227 327 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 NR1I3Q14994 352 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 DZIP1Q86YF9 867 aaKnown RBP16.99■□□□□ 0.31
PPM1B-205ENST00000409432 RASSF4Q9H2L5 321 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 BRMS1Q9HCU9 246 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 ANKIB1Q9P2G1 1089 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
PPM1B-205ENST00000409432 PRPF3O43395 683 aaKnown RBP16.99■□□□□ 0.31
PPM1B-205ENST00000409432 TBX2Q13207 712 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms