RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 RESTQ13127 1097 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 GRM4Q14833 912 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 CYP4F22Q6NT55 531 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 TATDN1Q6P1N9 297 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 TMTC3Q6ZXV5 915 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 NBPF11Q86T75 865 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 PNMA1Q8ND90 353 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 NUP133Q8WUM0 1156 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 TRIM34Q9BYJ4 488 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 COL4A5P29400 1685 aa11.36□□□□□ -0.59
POLR1A-202ENST00000409024 TBC1D12O60347 775 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 PRPF40AO75400 957 aaKnown RBP11.35□□□□□ -0.59
POLR1A-202ENST00000409024 SHMT1P34896 483 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 TNNI2P48788 182 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 FUT2Q10981 343 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 NFIAQ12857 509 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 SAFBQ15424 915 aaKnown RBP eCLIP11.35□□□□□ -0.59
POLR1A-202ENST00000409024 TMEM47Q9BQJ4 181 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 SLC26A6Q9BXS9 759 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 TDRD3Q9H7E2 651 aaKnown RBP11.35□□□□□ -0.59
POLR1A-202ENST00000409024 MTMR4Q9NYA4 1195 aa11.35□□□□□ -0.59
POLR1A-202ENST00000409024 ZNF70Q9UC06 446 aaPredicted RBP11.35□□□□□ -0.59
POLR1A-202ENST00000409024 TTLL1O95922 423 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 RXRAP19793 462 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 UBE2HP62256 183 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 EVX2Q03828 476 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 TNFAIP1Q13829 316 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 FOXD4L5Q5VV16 416 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-202ENST00000409024 ZSCAN29Q8IWY8 852 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-202ENST00000409024 SLC44A5Q8NCS7 719 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 FOXD4L4Q8WXT5 416 aaPredicted RBP11.34□□□□□ -0.59
POLR1A-202ENST00000409024 MKL1Q969V6 931 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 MYL10Q9BUA6 226 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 KANSL2Q9H9L4 492 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 MYOZ2Q9NPC6 264 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 GINM1Q9NU53 330 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 NYAP2Q9P242 653 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 ISY1Q9ULR0 285 aaKnown RBP11.34□□□□□ -0.59
POLR1A-202ENST00000409024 DDX49Q9Y6V7 483 aaKnown RBP11.34□□□□□ -0.59
POLR1A-202ENST00000409024 CASP8AP2Q9UKL3 1982 aa11.34□□□□□ -0.59
POLR1A-202ENST00000409024 PALM3A6NDB9 673 aaPredicted RBP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 NMT2O60551 498 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 U2AF2P26368 475 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 DNM1Q05193 864 aaKnown RBP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 CERKLQ49MI3 558 aaPredicted RBP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 KRT40Q6A162 431 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 TMEM179Q6ZVK1 233 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 USP48Q86UV5 1035 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 CCDC144CPQ8IYA2 1237 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 PHKBQ93100 1093 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 CEP95Q96GE4 821 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 SPZ1Q9BXG8 430 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 FOXP1Q9H334 677 aaPredicted RBP11.33□□□□□ -0.6
POLR1A-202ENST00000409024 SH3GLB2Q9NR46 395 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
POLR1A-202ENST00000409024 DDTLA6NHG4 134 aaPredicted RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 hCG_1984214I3L0E3 225 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 WNT10BO00744 389 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 AOC2O75106 756 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 PARP1P09874 1014 aaKnown RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 SNHG28P0DPA3 235 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 AKR1B1P15121 316 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 SOX10P56693 466 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 KIF23Q02241 960 aaPredicted RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 TCP10Q12799 353 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 SLC4A8Q2Y0W8 1093 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 GALNT17Q6IS24 598 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 SH3BP5LQ7L8J4 393 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 RAB11FIP4Q86YS3 637 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 ZFPM1Q8IX07 1006 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 ZNF713Q8N859 430 aaPredicted RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 SYAP1Q96A49 352 aaPredicted RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 HOOK2Q96ED9 719 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 CABP5Q9NP86 173 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 MAD2L2Q9UI95 211 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 ZBTB12Q9Y330 459 aaPredicted RBP11.32□□□□□ -0.6
POLR1A-202ENST00000409024 ZNF541Q9H0D2 1346 aa11.32□□□□□ -0.6
POLR1A-202ENST00000409024 ADAMTSL1Q8N6G6 1762 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 H7C1D1 291 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 YEATS4O95619 227 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 MMP1P03956 469 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 PFKFB3Q16875 520 aaPredicted RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 RBM26Q5T8P6 1007 aaKnown RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 GPC2Q8N158 579 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
POLR1A-202ENST00000409024 SPATA32Q96LK8 384 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 CSRNP1Q96S65 589 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 BRMS1Q9HCU9 246 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 POLR3EQ9NVU0 708 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 RTEL1Q9NZ71 1219 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 RCOR1Q9UKL0 485 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 CNPY2Q9Y2B0 182 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 PCDHAC2Q9Y5I4 1007 aa11.31□□□□□ -0.6
POLR1A-202ENST00000409024 TLL2Q9Y6L7 1015 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms