RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 SLC15A5A6NIM6 579 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 SPDYE16A6NNV3 312 aaPredicted RBP10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 FARP2O94887 1054 aaPredicted RBP10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 SGPL1O95470 568 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 COPB2P35606 906 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 PDE4BQ07343 736 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 WDR78Q5VTH9 848 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 GPR142Q7Z601 462 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 SHCBP1Q8NEM2 672 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 OSBP2Q969R2 916 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 NAPBQ9H115 298 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 TXNRD2Q9NNW7 524 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 PAK6Q9NQU5 681 aaPredicted RBP10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 SLC5A4Q9NY91 659 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 GJD2Q9UKL4 321 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 SYNPO2Q9UMS6 1093 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 CENPFP49454 3210 aa10.84□□□□□ -0.67
SNORD88A-201ENST00000408314 CYP2D7A0A087X1C5 515 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 GSG1L2A8MUP6 293 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 MINDY4BA8MYZ0 360 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 PATL2C9JE40 543 aaKnown RBP10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 STRNO43815 780 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 FLOT1O75955 427 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 TFRCP02786 760 aaKnown RBP10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 CYP2B6P20813 491 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 ATP2B2Q01814 1243 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 MAP2K5Q13163 448 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 SLFNL1Q499Z3 407 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 ZMYM1Q5SVZ6 1142 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 MFSD14CQ5VZR4 134 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 ZNF444Q8N0Y2 327 aaPredicted RBP10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 SHISA4Q96DD7 197 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 DEFB118Q96PH6 123 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 PORCNQ9H237 461 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 MROH8Q9H579 483 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 STAP2Q9UGK3 403 aa10.83□□□□□ -0.68
SNORD88A-201ENST00000408314 A0A1W2PRG0 241 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 SLC25A27O95847 323 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 EEF2P13639 858 aaKnown RBP10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 PRKAR2AP13861 404 aaKnown RBP10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 PTPREP23469 700 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 MFAP1P55081 439 aaKnown RBP10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 MORN1Q5T089 497 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 IFNL3Q8IZI9 196 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 TRIB2Q92519 343 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 NYAP2Q9P242 653 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 NR2E3Q9Y5X4 410 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 DOCK3Q8IZD9 2030 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 SALL3Q9BXA9 1300 aa10.82□□□□□ -0.68
SNORD88A-201ENST00000408314 ZNF236Q9UL36 1845 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 PLIN4Q96Q06 1357 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 M0R2C6 588 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 RAD21O60216 631 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 MSCO60682 206 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 CNMDO75829 334 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 HOXC6P09630 235 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 RASA1P20936 1047 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 DSG3P32926 999 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 PDE1AP54750 535 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 EVX2Q03828 476 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 GRB14Q14449 540 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 Q3C1V9 767 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 MAP3K21Q5TCX8 1036 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 NECAB2Q7Z6G3 386 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 ABRAQ8N0Z2 381 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 SPICE1Q8N0Z3 855 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 OTUD7AQ8TE49 926 aaPredicted RBP10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 USP6NLQ92738 828 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 DPF3Q92784 378 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 SPATC1LQ9H0A9 340 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 CRISPLD2Q9H0B8 497 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 HELLSQ9NRZ9 838 aa10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 CTDP1Q9Y5B0 961 aaPredicted RBP10.81□□□□□ -0.68
SNORD88A-201ENST00000408314 TTLL1O95922 423 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 CHGBP05060 677 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 TSPY3P0CV98 308 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 TSPY8P0CW00 308 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 PLS1Q14651 629 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 UBE2Q1Q7Z7E8 422 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 DPP9Q86TI2 863 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 CLEC10AQ8IUN9 316 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 SMC5Q8IY18 1101 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 MOV10L1Q9BXT6 1211 aaKnown RBP10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 BTBD7Q9P203 1132 aa10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 GREB1LQ9C091 1923 aaPredicted RBP10.8□□□□□ -0.68
SNORD88A-201ENST00000408314 PLXNB2O15031 1838 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 TRIM6-TRIM34B2RNG4 842 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 HIP1O00291 1037 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 FDX1P10109 184 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 FCER1AP12319 257 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 NT5C2P49902 561 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 PPARAQ07869 468 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 NEDD1Q8NHV4 660 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 ATG4CQ96DT6 458 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 LNPKQ9C0E8 428 aa10.79□□□□□ -0.68
SNORD88A-201ENST00000408314 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms