RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EVCP57679 992 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 UBXN2AP68543 259 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 ST3GAL1Q11201 340 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 STK3Q13188 491 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 ERO1BQ86YB8 467 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 MAGEB6Q8N7X4 407 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 ZNF384Q8TF68 577 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 OSBP2Q969R2 916 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 FAM163AQ96GL9 167 aaPredicted RBP15□□□□□ -0.01
SMARCB1-203ENST00000407082 SPATA32Q96LK8 384 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 ZDHHC15Q96MV8 337 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 WRNIP1Q96S55 665 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 PRO3102Q9H379 93 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 GDPD2Q9HCC8 539 aa15□□□□□ -0.01
SMARCB1-203ENST00000407082 MYPNQ86TC9 1320 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 M0R2C6 588 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 GNAT2P19087 354 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 CYP7A1P22680 504 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 CTGFP29279 349 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 ADD2P35612 726 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 CACNB3P54284 484 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 ALX1Q15699 326 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 ZSCAN30Q86W11 494 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 PDLIM2Q96JY6 352 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 DDX19AQ9NUU7 478 aaKnown RBP14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 SNCAIPQ9Y6H5 919 aa14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 MYO5AQ9Y4I1 1855 aaKnown RBP14.99□□□□□ -0.01
SMARCB1-203ENST00000407082 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 ZMYM6O95789 1325 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 GPAA1O43292 621 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 CAVIN2O95810 425 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 TFRCP02786 760 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 CCDC192P0DO97 292 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 PDE6AP16499 860 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 MNX1P50219 401 aaPredicted RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 APOBEC3HQ6NTF7 200 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 TMED8Q6PL24 325 aaPredicted RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 CPLX2Q6PUV4 134 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 C17orf99Q6UX52 265 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 PIAS4Q8N2W9 510 aaPredicted RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 U2AF1L4Q8WU68 220 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 TCEANC2Q96MN5 208 aa14.98□□□□□ -0.01
SMARCB1-203ENST00000407082 GAKO14976 1311 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 ZNF532Q9HCE3 1301 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 PDHXO00330 501 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 CDKL5O76039 1030 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 FGAP02671 866 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 SCRN1Q12765 414 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 NSUN7Q8NE18 718 aaKnown RBP14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 NOL10Q9BSC4 688 aaKnown RBP14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 UNC93B1Q9H1C4 597 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 ZCCHC17Q9NP64 241 aaKnown RBP14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 MYH2Q9UKX2 1941 aa14.97□□□□□ -0.01
SMARCB1-203ENST00000407082 RANBP2P49792 3224 aaKnown RBP14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 GPR75-ASB3A0A0A6YYF3 556 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 A0A1W2PPC1 479 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 TCRBV5S4A2TA0A5A2 114 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 CTAGE5O15320 804 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 PDIA3P30101 505 aaKnown RBP14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 BTDP43251 543 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 APOBRQ0VD83 1088 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 PPIL2Q13356 520 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 SLFNL1Q499Z3 407 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 UBE2Q1Q7Z7E8 422 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 ADGRA1Q86SQ6 560 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 DEFB123Q8N688 67 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 TMEM87BQ96K49 555 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 CNNM2Q9H8M5 875 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 USP40Q9NVE5 1235 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 TAF6LQ9Y6J9 622 aa14.96□□□□□ -0.01
SMARCB1-203ENST00000407082 A0A0C4DFX4 3053 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 DOCK2Q92608 1830 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 PRC1O43663 620 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 SGPL1O95470 568 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 BAG3O95817 575 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 CHGBP05060 677 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 TPM3P06753 285 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 PRKCZQ05513 592 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 RESTQ13127 1097 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 CDC42EP5Q6NZY7 148 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 MIGA2Q7L4E1 593 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 MIGA1Q8NAN2 632 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 MTA3Q9BTC8 594 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 NACAP1Q9BZK3 213 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 NUP62CLQ9H1M0 184 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 TMOD2Q9NZR1 351 aa14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 NAP1L2Q9ULW6 460 aaPredicted RBP14.95□□□□□ -0.02
SMARCB1-203ENST00000407082 MYH15Q9Y2K3 1946 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 PTPDC1A2A3K4 754 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 PATL2C9JE40 543 aaKnown RBP14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 CPLX1O14810 134 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 FCGRTP55899 365 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 PPP4CP60510 307 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 Q7L0L9 218 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 TTC6Q86TZ1 520 aa14.94□□□□□ -0.02
SMARCB1-203ENST00000407082 LEO1Q8WVC0 666 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms