RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 LZTS2Q9BRK4 669 aa28.31■■■□□ 2.12
DNMT3A-206ENST00000406659 FBXO2Q9UK22 296 aaPredicted RBP28.31■■■□□ 2.12
DNMT3A-206ENST00000406659 CDC42EP5Q6NZY7 148 aa28.3■■■□□ 2.12
DNMT3A-206ENST00000406659 DDX4Q9NQI0 724 aaKnown RBP28.3■■■□□ 2.12
DNMT3A-206ENST00000406659 KCNQ5Q9NR82 932 aa28.3■■■□□ 2.12
DNMT3A-206ENST00000406659 FAM205CA6NFA0 338 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 ECE2O60344 883 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 TOP1P11387 765 aaKnown RBP28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 FKBP1AP62942 108 aaKnown RBP28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 NPY5RQ15761 445 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 STRIP1Q5VSL9 837 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 SH3GLB2Q9NR46 395 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 FAM13BQ9NYF5 915 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 BAZ2BQ9UIF8 2168 aaKnown RBP28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 CALML3P27482 149 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 CRKP46108 304 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 CEP57L1Q8IYX8 460 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 TNFRSF25Q93038 417 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 NAT10Q9H0A0 1025 aaKnown RBP28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 KCNH3Q9ULD8 1083 aa28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 SRPRBQ9Y5M8 271 aaKnown RBP28.29■■■□□ 2.12
DNMT3A-206ENST00000406659 PALM3A6NDB9 673 aaPredicted RBP28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 GOLGA6L19H0YKK7 550 aa28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 BMP15O95972 392 aa28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 EARS2Q5JPH6 523 aaKnown RBP28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 APOBEC3HQ6NTF7 200 aaKnown RBP28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 ZNF579Q8NAF0 562 aaKnown RBP28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 CEP95Q96GE4 821 aa28.28■■■□□ 2.12
DNMT3A-206ENST00000406659 GABPAQ06546 454 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 IQCB1Q15051 598 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 CC2D2BQ6DHV5 1058 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 MRIQ9BWK5 157 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 MORC2Q9Y6X9 1032 aaPredicted RBP28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 VEGFAP15692 232 aaPredicted RBP28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 C7orf43Q8WVR3 580 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 OSBPL5Q9H0X9 879 aaPredicted RBP28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 SWAP70Q9UH65 585 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 ZKSCAN5Q9Y2L8 839 aa28.27■■■□□ 2.12
DNMT3A-206ENST00000406659 PARP1P09874 1014 aaKnown RBP28.26■■■□□ 2.11
DNMT3A-206ENST00000406659 SF3B2Q13435 895 aaKnown RBP28.26■■■□□ 2.11
DNMT3A-206ENST00000406659 DACT2Q5SW24 774 aa28.26■■■□□ 2.11
DNMT3A-206ENST00000406659 ZDHHC15Q96MV8 337 aa28.26■■■□□ 2.11
DNMT3A-206ENST00000406659 A0A087WWV3 80 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 BECN2A8MW95 431 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 KLRF2D3W0D1 207 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 SPECC1Q5M775 1068 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 KIAA0825Q8IV33 1275 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 SUPT20HQ8NEM7 779 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 SERPINB13Q9UIV8 391 aa28.25■■■□□ 2.11
DNMT3A-206ENST00000406659 HLA-DOAP06340 250 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 AOC3Q16853 763 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 TTC38Q5R3I4 469 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 GPKOWQ92917 476 aaPredicted RBP eCLIP28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 PLIN4Q96Q06 1357 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 GOLGA8HP0CJ92 632 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 NOVP48745 357 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 NLRP12P59046 1061 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 HDLBPQ00341 1268 aaKnown RBP28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 GRIN1Q05586 938 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 KRBA2Q6ZNG9 492 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 BLIDQ8IZY5 108 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 CNNM3Q8NE01 707 aa28.24■■■□□ 2.11
DNMT3A-206ENST00000406659 BAG6P46379 1132 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 TRAPPC10P48553 1259 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 RBM5P52756 815 aaKnown RBP eCLIP28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 LONRF3Q496Y0 759 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 NOM1Q5C9Z4 860 aaKnown RBP28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 PIK3AP1Q6ZUJ8 805 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 SPZ1Q9BXG8 430 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 PCDHA4Q9UN74 947 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 ADAMTSL1Q8N6G6 1762 aa28.23■■■□□ 2.11
DNMT3A-206ENST00000406659 CYTH3O43739 400 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 KIAA2012Q0VF49 1180 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 ZNF174Q15697 407 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 SLC35G1Q2M3R5 365 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 CCDC148Q8NFR7 591 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 TRIM5Q9C035 493 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 MTMR4Q9NYA4 1195 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 EIF2AK3Q9NZJ5 1116 aaKnown RBP28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 HOOK1Q9UJC3 728 aaKnown RBP28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 BIN1O00499 593 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 AKR1B1P15121 316 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 HEATR3Q7Z4Q2 680 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 CSRNP2Q9H175 543 aa28.22■■■□□ 2.11
DNMT3A-206ENST00000406659 MYO3BQ8WXR4 1341 aa28.21■■■□□ 2.11
DNMT3A-206ENST00000406659 USP17L2Q6R6M4 530 aa28.21■■■□□ 2.11
DNMT3A-206ENST00000406659 ELOA2Q8IYF1 753 aaPredicted RBP28.21■■■□□ 2.11
DNMT3A-206ENST00000406659 FERMT2Q96AC1 680 aa28.21■■■□□ 2.11
DNMT3A-206ENST00000406659 GOLGA6L6A8MZA4 724 aa28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 WWC2Q6AWC2 1192 aa28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 GALNT17Q6IS24 598 aa28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 DHX40Q8IX18 779 aaKnown RBP28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 FAM177A1Q8N128 213 aaPredicted RBP28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 BARHL2Q9NY43 387 aa28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 TUBE1Q9UJT0 475 aa28.2■■■□□ 2.11
DNMT3A-206ENST00000406659 C21orf2O43822 256 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 SMARCA1P28370 1054 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 ZNF75DP51815 510 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 NFIAQ12857 509 aa28.19■■■□□ 2.1
DNMT3A-206ENST00000406659 DPCR1Q3MIW9 517 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms