RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 FAM109BQ6ICB4 259 aaPredicted RBP25.52■■□□□ 1.68
RHBDD3-202ENST00000406335 SAMD1Q6SPF0 538 aaPredicted RBP25.52■■□□□ 1.68
RHBDD3-202ENST00000406335 POTEB2H3BUK9 544 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 STRNO43815 780 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 ADORA2AP29274 412 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 SHMT1P34896 483 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 AACSQ86V21 672 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 CRNKL1Q9BZJ0 848 aaKnown RBP25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 MCM9Q9NXL9 1143 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 SIPA1L1O43166 1804 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 FOCADQ5VW36 1801 aa25.51■■□□□ 1.67
RHBDD3-202ENST00000406335 TMED8Q6PL24 325 aaPredicted RBP25.5■■□□□ 1.67
RHBDD3-202ENST00000406335 TRPV1Q8NER1 839 aa25.5■■□□□ 1.67
RHBDD3-202ENST00000406335 YTHDC1Q96MU7 727 aaKnown RBP25.5■■□□□ 1.67
RHBDD3-202ENST00000406335 MOV10L1Q9BXT6 1211 aaKnown RBP25.5■■□□□ 1.67
RHBDD3-202ENST00000406335 BCL11AQ9H165 835 aa25.5■■□□□ 1.67
RHBDD3-202ENST00000406335 TTF1Q15361 905 aaPredicted RBP25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 SLC39A5Q6ZMH5 540 aa25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 NCAPG2Q86XI2 1143 aa25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 ERC1Q8IUD2 1116 aa25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 GUCD1Q96NT3 240 aa25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 IL1RAPL2Q9NP60 686 aa25.49■■□□□ 1.67
RHBDD3-202ENST00000406335 APBB1O00213 710 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 CYBAP13498 195 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 ERCC3P19447 782 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 OLFML2BQ68BL8 750 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 RHPN1Q8TCX5 695 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 COL25A1Q9BXS0 654 aaPredicted RBP25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 SPATC1LQ9H0A9 340 aa25.48■■□□□ 1.67
RHBDD3-202ENST00000406335 HMMRO75330 724 aa25.47■■□□□ 1.67
RHBDD3-202ENST00000406335 GUCY1A2P33402 732 aa25.47■■□□□ 1.67
RHBDD3-202ENST00000406335 SLC9C2Q5TAH2 1124 aa25.47■■□□□ 1.67
RHBDD3-202ENST00000406335 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
RHBDD3-202ENST00000406335 SEPT4O43236 478 aa25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 SHHQ15465 462 aa25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 HSP90AB4PQ58FF6 505 aa25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 PRAMEF19Q5SWL8 479 aa25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 FERMT2Q96AC1 680 aa25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 RIOK1Q9BRS2 568 aaKnown RBP25.46■■□□□ 1.67
RHBDD3-202ENST00000406335 A0A1W2PRG0 241 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 FLOT1O75955 427 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 ADCYAP1R1P41586 468 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 SHCBP1Q8NEM2 672 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 BADQ92934 168 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 MROH8Q9H579 483 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 ARHGEF10LQ9HCE6 1279 aa25.45■■□□□ 1.66
RHBDD3-202ENST00000406335 MYH1P12882 1939 aa25.44■■□□□ 1.66
RHBDD3-202ENST00000406335 TRIM60Q495X7 471 aa25.44■■□□□ 1.66
RHBDD3-202ENST00000406335 MB21D1Q8N884 522 aa25.44■■□□□ 1.66
RHBDD3-202ENST00000406335 DNAJC2Q99543 621 aaKnown RBP25.44■■□□□ 1.66
RHBDD3-202ENST00000406335 MYH7P12883 1935 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 COBLO75128 1261 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 TMEM179Q6ZVK1 233 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 SPICE1Q8N0Z3 855 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 SDR42E1Q8WUS8 393 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 KIF1BPQ96EK5 621 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 SH2D4AQ9H788 454 aa25.43■■□□□ 1.66
RHBDD3-202ENST00000406335 FCER1AP12319 257 aa25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 PDE6AP16499 860 aa25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 DSG3P32926 999 aa25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 GABPAQ06546 454 aa25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 CDX2Q99626 313 aaPredicted RBP25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 SWAP70Q9UH65 585 aa25.42■■□□□ 1.66
RHBDD3-202ENST00000406335 ZNF532Q9HCE3 1301 aa25.41■■□□□ 1.66
RHBDD3-202ENST00000406335 RAD21O60216 631 aa25.41■■□□□ 1.66
RHBDD3-202ENST00000406335 C9orf50Q5SZB4 431 aa25.41■■□□□ 1.66
RHBDD3-202ENST00000406335 AMOTL1Q8IY63 956 aa25.41■■□□□ 1.66
RHBDD3-202ENST00000406335 SEMA6BQ9H3T3 888 aa25.41■■□□□ 1.66
RHBDD3-202ENST00000406335 GOLIM4O00461 696 aa25.4■■□□□ 1.66
RHBDD3-202ENST00000406335 ICA1Q05084 483 aa25.4■■□□□ 1.66
RHBDD3-202ENST00000406335 LRRC41Q15345 812 aa25.4■■□□□ 1.66
RHBDD3-202ENST00000406335 ATG4CQ96DT6 458 aa25.4■■□□□ 1.66
RHBDD3-202ENST00000406335 CYP2D6P10635 497 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 RARBP10826 455 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 EVX2Q03828 476 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 ABRAQ8N0Z2 381 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 CLASRPQ8N2M8 674 aaKnown RBP25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 SLC44A5Q8NCS7 719 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 MAFAQ8NHW3 353 aaPredicted RBP25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 DYNLL2Q96FJ2 89 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 MAML3Q96JK9 1138 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 MMP19Q99542 508 aa25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 DCP1AQ9NPI6 582 aaPredicted RBP25.39■■□□□ 1.66
RHBDD3-202ENST00000406335 A0A0C4DFX4 3053 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 RAB11FIP3O75154 756 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 SLC25A27O95847 323 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 IFIT2P09913 472 aaKnown RBP25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 FAM47AQ5JRC9 791 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 RNF180Q86T96 592 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 LCORLQ8N3X6 602 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 ARMT1Q9H993 441 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 XPNPEP3Q9NQH7 507 aa25.38■■□□□ 1.65
RHBDD3-202ENST00000406335 RRP1P56182 461 aaKnown RBP25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 KCTD2Q14681 263 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 KIAA1755Q5JYT7 1200 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 SH3RF1Q7Z6J0 888 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 DDRGK1Q96HY6 314 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 PDLIM7Q9NR12 457 aa25.37■■□□□ 1.65
RHBDD3-202ENST00000406335 TMX2Q9Y320 296 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms