RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 WISP1O95388 367 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 TIAF1O95411 115 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 HCLS1P14317 486 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 SLBPQ14493 270 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 HSP90AA2PQ14568 343 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 PRAMEF13Q5VWM6 474 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 LINC00114Q6XXX2 140 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 CCDC144CPQ8IYA2 1237 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 ISL2Q96A47 359 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 CDC6Q99741 560 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 HAUS7Q99871 368 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 FBRSQ9HAH7 460 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 LRP2BPQ9P2M1 347 aa6.67□□□□□ -1.34
HMGB3P18-201ENST00000406327 TRAV20A0A0B4J274 112 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 BTBD11A6QL63 1104 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 SART1O43290 800 aaKnown RBP6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 PPM1BO75688 479 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 UBOX5O94941 541 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 NEFMP07197 916 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 FAM153BP0C7A2 387 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 TMEM192Q8IY95 271 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 TMEM130Q8N3G9 435 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 DPH2Q9BQC3 489 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 PLVAPQ9BX97 442 aa6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 MKRN2Q9H000 416 aaKnown RBP6.66□□□□□ -1.34
HMGB3P18-201ENST00000406327 SCO2A0A1W2PP80 73 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 NOP56O00567 594 aaKnown RBP6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 GAS2O43903 313 aaKnown RBP6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 ADCY3O60266 1144 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 ETV3P41162 512 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 CHRNA4P43681 627 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 DOC2BQ14184 412 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 NKG7Q16617 165 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 POMZP3Q6PJE2 187 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 ARMCX6Q7L4S7 300 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 MFSD3Q96ES6 412 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 TRIM11Q96F44 468 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 AARSD1Q9BTE6 412 aaKnown RBP6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 WHRNQ9P202 907 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 ACTL7BQ9Y614 415 aa6.65□□□□□ -1.34
HMGB3P18-201ENST00000406327 RFPL3O75679 317 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 TP53P04637 393 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 EPHX1P07099 455 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 VIL1P09327 827 aaKnown RBP6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 HOXB4P17483 251 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 MASP1P48740 699 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 USP11P51784 963 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 TKFCQ3LXA3 575 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 PPFIBP1Q86W92 1011 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 C2CD4AQ8NCU7 369 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 BAHD1Q8TBE0 780 aaPredicted RBP6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 NINJ1Q92982 152 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 PPP1R14AQ96A00 147 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 ASPNQ9BXN1 380 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 KLHL25Q9H0H3 589 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 CD2APQ9Y5K6 639 aa6.64□□□□□ -1.35
HMGB3P18-201ENST00000406327 DNAJC25-GNG10A0A024R161 153 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 A0A1W2PQU0 124 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 F8W735 103 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 PLD2O14939 933 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 ITGA4P13612 1032 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 DRD2P14416 443 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 NRG1Q02297 640 aaPredicted RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 FNDC3BQ53EP0 1204 aaKnown RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 DALRD3Q5D0E6 543 aaKnown RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 TDRD10Q5VZ19 366 aaKnown RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 KRT26Q7Z3Y9 468 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 ADAT2Q7Z6V5 191 aaKnown RBP6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 SCUBE1Q8IWY4 988 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 NIM1KQ8IY84 436 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 COX4I2Q96KJ9 171 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 DHRS4Q9BTZ2 278 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 AKTIPQ9H8T0 292 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 CEP131Q9UPN4 1083 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 SUGT1Q9Y2Z0 365 aa6.63□□□□□ -1.35
HMGB3P18-201ENST00000406327 TRBV23-1A0A0A0MS06 115 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 RAB11FIP3O75154 756 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 APPP05067 770 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 FGFR1P11362 822 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 CYP7A1P22680 504 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 MAP7Q14244 749 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 UVSSAQ2YD98 709 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 AXDND1Q5T1B0 1012 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 NBPF12Q5TAG4 269 aaPredicted RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 C7orf61Q8IZ16 206 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 BVESQ8NE79 360 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 RNF141Q8WVD5 230 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 MRPL4Q9BYD3 311 aaKnown RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 NCOA5Q9HCD5 579 aaKnown RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 TYW1Q9NV66 732 aaKnown RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 FAM86C1Q9NVL1 165 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 PRR13Q9NZ81 148 aa6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 MRPS23Q9Y3D9 190 aaKnown RBP6.62□□□□□ -1.35
HMGB3P18-201ENST00000406327 A0A087WZG4 1122 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms