RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 APBB1IPQ7Z5R6 666 aaPredicted RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 CABP7Q86V35 215 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 MED23Q9ULK4 1368 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 CTDSPL2Q05D32 466 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 ARHGEF2Q92974 986 aaKnown RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 GPCPD1Q9NPB8 672 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 RGS16O15492 202 aaPredicted RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 UAP1Q16222 522 aaPredicted RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 EAF2Q96CJ1 260 aaPredicted RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 VCXQ9H320 206 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
SNED1-205ENST00000405547 PYCARDQ9ULZ3 195 aa14.78□□□□□ -0.04
SNED1-205ENST00000405547 GAS8O95995 478 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 FAM212AQ96EL1 285 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 ACSBG1Q96GR2 724 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 MRPL44Q9H9J2 332 aaKnown RBP14.77□□□□□ -0.04
SNED1-205ENST00000405547 IKBKBO14920 756 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 CTNNA1P35221 906 aaKnown RBP14.77□□□□□ -0.04
SNED1-205ENST00000405547 CCDC105Q8IYK2 499 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 SH2D4AQ9H788 454 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 CDC23Q9UJX2 597 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 APBA1Q02410 837 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 SCRN1Q12765 414 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 SRGAP1Q7Z6B7 1085 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 POLR3EQ9NVU0 708 aa14.77□□□□□ -0.04
SNED1-205ENST00000405547 PREX2Q70Z35 1606 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 ADCY7P51828 1080 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 HOMER3Q9NSC5 361 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 BCAS4Q8TDM0 211 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 RAB3IPQ96QF0 476 aaPredicted RBP14.77□□□□□ -0.05
SNED1-205ENST00000405547 PPANQ9NQ55 473 aaKnown RBP14.77□□□□□ -0.05
SNED1-205ENST00000405547 GCNT3O95395 438 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 GKAP1Q5VSY0 366 aaPredicted RBP14.77□□□□□ -0.05
SNED1-205ENST00000405547 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 RNF10Q8N5U6 811 aaKnown RBP14.77□□□□□ -0.05
SNED1-205ENST00000405547 CARMIL3Q8ND23 1372 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 CDC42BPBQ9Y5S2 1711 aa14.77□□□□□ -0.05
SNED1-205ENST00000405547 ARL1P40616 181 aaPredicted RBP14.76□□□□□ -0.05
SNED1-205ENST00000405547 BIRC3Q13489 604 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 BLZF1Q9H2G9 400 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 AATFQ9NY61 560 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNED1-205ENST00000405547 CTTNBP2NLQ9P2B4 639 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 ARHGEF35A5YM69 484 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 XRCC5P13010 732 aaKnown RBP14.76□□□□□ -0.05
SNED1-205ENST00000405547 STAT1P42224 750 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
SNED1-205ENST00000405547 PPP6R2O75170 966 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 LGSNQ5TDP6 509 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 ATP7BP35670 1465 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 SMC1BQ8NDV3 1235 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 CD2BP2O95400 341 aaKnown RBP14.76□□□□□ -0.05
SNED1-205ENST00000405547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.76□□□□□ -0.05
SNED1-205ENST00000405547 RNF40O75150 1001 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 PCP11498 1178 aaKnown RBP14.76□□□□□ -0.05
SNED1-205ENST00000405547 ZNF131P52739 623 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 PLS1Q14651 629 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 CCDC38Q502W7 563 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 VPS52Q8N1B4 723 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 RABEP2Q9H5N1 569 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 CAPN7Q9Y6W3 813 aa14.76□□□□□ -0.05
SNED1-205ENST00000405547 CCDC151A5D8V7 595 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 DKC1O60832 514 aaKnown RBP eCLIP14.75□□□□□ -0.05
SNED1-205ENST00000405547 GNGT1P63211 74 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 FGAP02671 866 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 PDIA3P30101 505 aaKnown RBP14.75□□□□□ -0.05
SNED1-205ENST00000405547 SEPT6Q14141 434 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 HHATQ5VTY9 493 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 STAMQ92783 540 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 SAP30BPQ9UHR5 308 aaKnown RBP14.75□□□□□ -0.05
SNED1-205ENST00000405547 ZBTB21Q9ULJ3 1066 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 GTPBP6O43824 516 aaPredicted RBP14.75□□□□□ -0.05
SNED1-205ENST00000405547 MAGEF1Q9HAY2 307 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 CABLES1Q8TDN4 633 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 GDAP1L1Q96MZ0 367 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 PPP1R12CQ9BZL4 782 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 PDE11AQ9HCR9 933 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 DTNBO60941 627 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 SLC8A1P32418 973 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 DPH6Q7L8W6 267 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 EDC3Q96F86 508 aaKnown RBP14.75□□□□□ -0.05
SNED1-205ENST00000405547 NRBP1Q9UHY1 535 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 I3L4J1 428 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 ITIH3Q06033 890 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 DYMQ7RTS9 669 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 EYA3Q99504 573 aa14.75□□□□□ -0.05
SNED1-205ENST00000405547 AATKQ6ZMQ8 1374 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 SLC39A14Q15043 492 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 FAM204AQ9H8W3 233 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 ARHGEF10LQ9HCE6 1279 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 TET3O43151 1660 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 BACH1O14867 736 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 PRDM1O75626 825 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 BAIAP2L1Q9UHR4 511 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 ODF2LQ9ULJ1 636 aa14.74□□□□□ -0.05
SNED1-205ENST00000405547 SDCCAG8Q86SQ7 713 aaPredicted RBP14.74□□□□□ -0.05
SNED1-205ENST00000405547 PSMD1Q99460 953 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms