RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 SYMPKQ92797 1274 aaKnown RBP17.55■□□□□ 0.4
ATG4B-205ENST00000404914 HPCAL4Q9UM19 191 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 PRKAB2O43741 272 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 CAPZA3Q96KX2 299 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 STRBPQ96SI9 672 aaKnown RBP17.55■□□□□ 0.4
ATG4B-205ENST00000404914 JRKLQ9Y4A0 524 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 TCRBV5S4A2TA0A5A2 114 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 N4BP3O15049 544 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 GTF2A1P52655 376 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-205ENST00000404914 IRX3P78415 501 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-205ENST00000404914 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 WDR93Q6P2C0 686 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-205ENST00000404914 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■□□□ 13.4
ATG4B-205ENST00000404914 FOXP1Q9H334 677 aaPredicted RBP17.54■□□□□ 0.4
ATG4B-205ENST00000404914 PRDM1O75626 825 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 LIFRP42702 1097 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 PHKA1P46020 1223 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 USP14P54578 494 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 MAPK8IP1Q9UQF2 711 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 CHD4Q14839 1912 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 EP400Q96L91 3159 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 KRT9P35527 623 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 RTN1Q16799 776 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 TRAPPC11Q7Z392 1133 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 TMTC1Q8IUR5 882 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 AFAP1L1Q8TED9 768 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 DRC1Q96MC2 740 aa17.54■□□□□ 0.4
ATG4B-205ENST00000404914 MKRN1Q9UHC7 482 aaKnown RBP17.54■□□□□ 0.4
ATG4B-205ENST00000404914 CRACR2BQ8N4Y2 399 aaPredicted RBP17.53■□□□□ 0.4
ATG4B-205ENST00000404914 ARMT1Q9H993 441 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 XDHP47989 1333 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 AGPSO00116 658 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 SNAP23O00161 211 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 GGCXP38435 758 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 MEX3CQ5U5Q3 659 aaKnown RBP17.53■□□□□ 0.4
ATG4B-205ENST00000404914 IFNL3Q8IZI9 196 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 GBP3Q9H0R5 595 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 VPS54Q9P1Q0 977 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 RIPOR2Q9Y4F9 1068 aa17.53■□□□□ 0.4
ATG4B-205ENST00000404914 ZNF185O15231 689 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.4
ATG4B-205ENST00000404914 TUBB2AQ13885 445 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 KANK3Q6NY19 840 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 MTRQ99707 1265 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 TUBB2BQ9BVA1 445 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 CARD10Q9BWT7 1032 aa17.52■□□□□ 0.4
ATG4B-205ENST00000404914 ATRNO75882 1429 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 CDHR2Q9BYE9 1310 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 PPFIA4O75335 1185 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 COPB1P53618 953 aaKnown RBP17.52■□□□□ 0.39
ATG4B-205ENST00000404914 HERVK_113P62684 666 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 TCIRG1Q13488 830 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 SART3Q15020 963 aaKnown RBP17.52■□□□□ 0.39
ATG4B-205ENST00000404914 CYP26C1Q6V0L0 522 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 GOLGA6L1Q8N7Z2 621 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 ISCA1Q9BUE6 129 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.39
ATG4B-205ENST00000404914 MYH6P13533 1939 aa17.52■□□□□ 0.39
ATG4B-205ENST00000404914 BAZ2BQ9UIF8 2168 aaKnown RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 ITIH6Q6UXX5 1313 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 PDE2AO00408 941 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 MBD4O95243 580 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 AIDAQ96BJ3 306 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 PARP4Q9UKK3 1724 aaKnown RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 NDUFA10O95299 355 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 MRPS25P82663 173 aaKnown RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 IFIT5Q13325 482 aaKnown RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 TRIM22Q8IYM9 498 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 CCDC51Q96ER9 411 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 CTAGE1Q96RT6 745 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 GREM2Q9H772 168 aa17.51■□□□□ 0.39
ATG4B-205ENST00000404914 EPN1Q9Y6I3 576 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-205ENST00000404914 RCCD1A6NED2 376 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 UBE3CQ15386 1083 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 RRAGBQ5VZM2 374 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 LDHAL6AQ6ZMR3 332 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 TTLL11Q8NHH1 800 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 NAPBQ9H115 298 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATG4B-205ENST00000404914 LIMA1Q9UHB6 759 aaKnown RBP17.5■□□□□ 0.39
ATG4B-205ENST00000404914 TTC26A0AVF1 554 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 ZNF174Q15697 407 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 E2F4Q16254 413 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 HELBQ8NG08 1087 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-205ENST00000404914 WASF1Q92558 559 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 KAT2BQ92831 832 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 KAT14Q9H8E8 782 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 AFF2P51816 1311 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 DEXIO95424 95 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 USP21Q9UK80 565 aa17.5■□□□□ 0.39
ATG4B-205ENST00000404914 TRIM49BA6NDI0 452 aa17.49■□□□□ 0.39
ATG4B-205ENST00000404914 TRIM75PA6NK02 468 aa17.49■□□□□ 0.39
ATG4B-205ENST00000404914 ADAMTS3O15072 1205 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms