RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
TPM1-207ENST00000403994 MX1P20591 662 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 CYP2B6P20813 491 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 CCNA1P78396 465 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 PLEKHH3Q7Z736 793 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 SIAH1Q8IUQ4 282 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 CCAR1Q8IX12 1150 aaKnown RBP18.44■□□□□ 0.54
TPM1-207ENST00000403994 CCDC17Q96LX7 622 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 APBA2Q99767 749 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 ARHGEF10LQ9HCE6 1279 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 EPB41L4AQ9HCS5 686 aaPredicted RBP18.44■□□□□ 0.54
TPM1-207ENST00000403994 MYH4Q9Y623 1939 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 TRIOBPQ9H2D6 2365 aa18.44■□□□□ 0.54
TPM1-207ENST00000403994 ERC2O15083 957 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 GPAA1O43292 621 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 GLRX3O76003 335 aaKnown RBP18.43■□□□□ 0.54
TPM1-207ENST00000403994 ZKSCAN1P17029 563 aaPredicted RBP18.43■□□□□ 0.54
TPM1-207ENST00000403994 RGS2P41220 211 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 MAP3K21Q5TCX8 1036 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 LPAR1Q92633 364 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 GCC1Q96CN9 775 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 CRISPLD2Q9H0B8 497 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 SH2D4AQ9H788 454 aa18.43■□□□□ 0.54
TPM1-207ENST00000403994 CWC22Q9HCG8 908 aaKnown RBP18.43■□□□□ 0.54
TPM1-207ENST00000403994 PRKAR2AP13861 404 aaKnown RBP18.42■□□□□ 0.54
TPM1-207ENST00000403994 SBK1Q52WX2 424 aa18.42■□□□□ 0.54
TPM1-207ENST00000403994 SPICE1Q8N0Z3 855 aa18.42■□□□□ 0.54
TPM1-207ENST00000403994 VCPKMTQ9H867 229 aa18.42■□□□□ 0.54
TPM1-207ENST00000403994 TMX2Q9Y320 296 aa18.42■□□□□ 0.54
TPM1-207ENST00000403994 RPTORQ8N122 1335 aa18.42■□□□□ 0.54
TPM1-207ENST00000403994 TFRCP02786 760 aaKnown RBP18.41■□□□□ 0.54
TPM1-207ENST00000403994 CCL14Q16627 93 aa18.41■□□□□ 0.54
TPM1-207ENST00000403994 WDR78Q5VTH9 848 aa18.41■□□□□ 0.54
TPM1-207ENST00000403994 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
TPM1-207ENST00000403994 FSD1Q9BTV5 496 aa18.41■□□□□ 0.54
TPM1-207ENST00000403994 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
TPM1-207ENST00000403994 H0YGN5 161 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 WDR46O15213 610 aaKnown RBP18.4■□□□□ 0.54
TPM1-207ENST00000403994 EEF2P13639 858 aaKnown RBP18.4■□□□□ 0.54
TPM1-207ENST00000403994 CAPN2P17655 700 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 GNAT2P19087 354 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 RASA1P20936 1047 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 MAP2K5Q13163 448 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 COG2Q14746 738 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 LRRFIP1Q32MZ4 808 aaKnown RBP18.4■□□□□ 0.54
TPM1-207ENST00000403994 DIS3LQ8TF46 1054 aaKnown RBP18.4■□□□□ 0.54
TPM1-207ENST00000403994 HTATIP2Q9BUP3 242 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.4■□□□□ 0.54
TPM1-207ENST00000403994 KANSL2Q9H9L4 492 aa18.4■□□□□ 0.54
TPM1-207ENST00000403994 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 FLOT1O75955 427 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 TDO2P48775 406 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 ATP2B2Q01814 1243 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 HDAC1Q13547 482 aaPredicted RBP18.39■□□□□ 0.53
TPM1-207ENST00000403994 GRB14Q14449 540 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 SEC62Q99442 399 aaKnown RBP18.39■□□□□ 0.53
TPM1-207ENST00000403994 IVNS1ABPQ9Y6Y0 642 aa18.39■□□□□ 0.53
TPM1-207ENST00000403994 MINDY4BA8MYZ0 360 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 PTPREP23469 700 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 CACNB2Q08289 660 aaPredicted RBP18.38■□□□□ 0.53
TPM1-207ENST00000403994 HABP4Q5JVS0 413 aaKnown RBP18.38■□□□□ 0.53
TPM1-207ENST00000403994 ZMYM1Q5SVZ6 1142 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 MB21D1Q8N884 522 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 DPF3Q92784 378 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 ATG4CQ96DT6 458 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 MOV10L1Q9BXT6 1211 aaKnown RBP18.38■□□□□ 0.53
TPM1-207ENST00000403994 SPATC1LQ9H0A9 340 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 LAMA3Q16787 3333 aa18.38■□□□□ 0.53
TPM1-207ENST00000403994 SZT2Q5T011 3432 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 DSG3P32926 999 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 ANKRD45Q5TZF3 282 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 STK11IPQ8N1F8 1099 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 ANKLE1Q8NAG6 615 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 FLRT1Q9NZU1 646 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 PLIN4Q96Q06 1357 aa18.37■□□□□ 0.53
TPM1-207ENST00000403994 APPP05067 770 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 HOXC6P09630 235 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 SHCBP1Q8NEM2 672 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 PAWRQ96IZ0 340 aaKnown RBP18.36■□□□□ 0.53
TPM1-207ENST00000403994 MKNK2Q9HBH9 465 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 ZBTB47Q9UFB7 747 aaPredicted RBP18.36■□□□□ 0.53
TPM1-207ENST00000403994 PLXNA1Q9UIW2 1896 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 OGDHLQ9ULD0 1010 aa18.36■□□□□ 0.53
TPM1-207ENST00000403994 PRDM1O75626 825 aa18.35■□□□□ 0.53
TPM1-207ENST00000403994 ERCC3P19447 782 aa18.35■□□□□ 0.53
TPM1-207ENST00000403994 CCND3P30281 292 aaPredicted RBP18.35■□□□□ 0.53
TPM1-207ENST00000403994 MNX1P50219 401 aaPredicted RBP18.35■□□□□ 0.53
TPM1-207ENST00000403994 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
TPM1-207ENST00000403994 IFNL3Q8IZI9 196 aa18.35■□□□□ 0.53
TPM1-207ENST00000403994 FBXO28Q9NVF7 368 aa18.35■□□□□ 0.53
TPM1-207ENST00000403994 STAP2Q9UGK3 403 aa18.35■□□□□ 0.53
TPM1-207ENST00000403994 COLQQ9Y215 455 aaPredicted RBP18.35■□□□□ 0.53
TPM1-207ENST00000403994 ZNFX1Q9P2E3 1918 aaKnown RBP18.34■□□□□ 0.53
TPM1-207ENST00000403994 IGKV6D-41A0A0C4DH26 115 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 PATL2C9JE40 543 aaKnown RBP18.34■□□□□ 0.53
TPM1-207ENST00000403994 FOXP2O15409 715 aa18.34■□□□□ 0.53
TPM1-207ENST00000403994 ADORA2AP29274 412 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms