RNA–Protein interactions for RNA: ENST00000403890.7

NUP43-204, Transcript of nucleoporin 43, humanhuman

TSL 2

Gene NUP43, Length 1,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-204ENST00000403890 FRMPD3Q5JV73 1810 aa11.51□□□□□ -0.57
NUP43-204ENST00000403890 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 IGHA2P01877 340 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 CLTBP09497 229 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 RFX5P48382 616 aaPredicted RBP11.5□□□□□ -0.57
NUP43-204ENST00000403890 LSM11P83369 360 aaKnown RBP eCLIP11.5□□□□□ -0.57
NUP43-204ENST00000403890 MECOMQ03112 1051 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 ANO1Q5XXA6 986 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 CCDC102BQ68D86 513 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 NECAB3Q96P71 396 aaPredicted RBP11.5□□□□□ -0.57
NUP43-204ENST00000403890 LRFN3Q9BTN0 628 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
NUP43-204ENST00000403890 C2orf72A6NCS6 295 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 SEPT4O43236 478 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 CNMDO75829 334 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 LDHCP07864 332 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 BMP1P13497 986 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 IGFBP4P22692 258 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 JAG1P78504 1218 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 RASGRF1Q13972 1273 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 GRB14Q14449 540 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 LRRC41Q15345 812 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 USP17L2Q6R6M4 530 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 CCDC129Q6ZRS4 1044 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 ERICH6Q7L0X2 663 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 DPP9Q86TI2 863 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 GINM1Q9NU53 330 aa11.49□□□□□ -0.57
NUP43-204ENST00000403890 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L20D6RJB6 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 GSTO1P78417 241 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 USP17L24Q0WX57 530 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 ADGRE1Q14246 886 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 OLFML2BQ68BL8 750 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 ZNF384Q8TF68 577 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 DHX36Q9H2U1 1008 aaKnown RBP11.48□□□□□ -0.57
NUP43-204ENST00000403890 PRKRIP1Q9H875 184 aaPredicted RBP11.48□□□□□ -0.57
NUP43-204ENST00000403890 TMEM39AQ9NV64 488 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
NUP43-204ENST00000403890 PHF24Q9UPV7 400 aa11.48□□□□□ -0.57
NUP43-204ENST00000403890 PDS5AQ29RF7 1337 aaKnown RBP11.48□□□□□ -0.57
NUP43-204ENST00000403890 CIAO1O76071 339 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 AAK1Q2M2I8 961 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 TMEM31Q5JXX7 168 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 FOXP4Q8IVH2 680 aaPredicted RBP11.47□□□□□ -0.57
NUP43-204ENST00000403890 WDR63Q8IWG1 891 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 TEX11Q8IYF3 940 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.572e-6■■□□□ 12.7
NUP43-204ENST00000403890 PBX4Q9BYU1 374 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 USP44Q9H0E7 712 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 SIL1Q9H173 461 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 EPHX3Q9H6B9 360 aa11.47□□□□□ -0.57
NUP43-204ENST00000403890 ATAD5Q96QE3 1844 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 STRNO43815 780 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 PQBP1O60828 265 aaKnown RBP11.46□□□□□ -0.57
NUP43-204ENST00000403890 ADORA1P30542 326 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 SHROOM1Q2M3G4 852 aaPredicted RBP11.46□□□□□ -0.57
NUP43-204ENST00000403890 PRAMEF19Q5SWL8 479 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 CCDC174Q6PII3 467 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 LBX2Q6XYB7 198 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 CATSPERGQ6ZRH7 1159 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 ALYREFQ86V81 257 aaKnown RBP11.46□□□□□ -0.57
NUP43-204ENST00000403890 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.46□□□□□ -0.576e-8■□□□□ 8.6
NUP43-204ENST00000403890 TRIM34Q9BYJ4 488 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 BTBD7Q9P203 1132 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 ZBTB21Q9ULJ3 1066 aa11.46□□□□□ -0.57
NUP43-204ENST00000403890 TCF20Q9UGU0 1960 aaKnown RBP11.46□□□□□ -0.58
NUP43-204ENST00000403890 GRXCR1A8MXD5 290 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 DCDC2CA8MYV0 355 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 GDF11O95390 407 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 NUDT7P0C024 238 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 ADORA2AP29274 412 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 IL15P40933 162 aaPredicted RBP11.45□□□□□ -0.58
NUP43-204ENST00000403890 FAM47AQ5JRC9 791 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 RNF180Q86T96 592 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 METTL16Q86W50 562 aaKnown RBP11.45□□□□□ -0.58
NUP43-204ENST00000403890 CRACR2BQ8N4Y2 399 aaPredicted RBP11.45□□□□□ -0.58
NUP43-204ENST00000403890 NSUN4Q96CB9 384 aaKnown RBP11.45□□□□□ -0.58
NUP43-204ENST00000403890 C12orf42Q96LP6 360 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 TOX2Q96NM4 488 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 DNAJC18Q9H819 358 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 SLC5A4Q9NY91 659 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 MSRAQ9UJ68 235 aa11.45□□□□□ -0.58
NUP43-204ENST00000403890 TIMP1P01033 207 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 TIMM10P62072 90 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 TFF2Q03403 129 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 FAAP100Q0VG06 881 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 PPIGQ13427 754 aaKnown RBP eCLIP11.44□□□□□ -0.582e-6■■■□□ 17.2
NUP43-204ENST00000403890 RAB30Q15771 203 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
NUP43-204ENST00000403890 TMEM240Q5SV17 173 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 RASIP1Q5U651 963 aa11.44□□□□□ -0.58
NUP43-204ENST00000403890 ANKRD33Q7Z3H0 272 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms