RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 N4BP3O15049 544 aa19.33■□□□□ 0.69
SNRNP70-202ENST00000401730 PDE4CQ08493 712 aa19.33■□□□□ 0.69
SNRNP70-202ENST00000401730 ZFP91Q96JP5 570 aaPredicted RBP19.33■□□□□ 0.69
SNRNP70-202ENST00000401730 RNF26Q9BY78 433 aaPredicted RBP19.33■□□□□ 0.69
SNRNP70-202ENST00000401730 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
SNRNP70-202ENST00000401730 PNMA6AP0CW24 399 aaPredicted RBP19.33■□□□□ 0.68
SNRNP70-202ENST00000401730 FXR1P51114 621 aaKnown RBP eCLIP19.33■□□□□ 0.68
SNRNP70-202ENST00000401730 SLC44A5Q8NCS7 719 aa19.33■□□□□ 0.68
SNRNP70-202ENST00000401730 PHF20Q9BVI0 1012 aa19.33■□□□□ 0.68
SNRNP70-202ENST00000401730 TAF1P21675 1872 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 TRIM49BA6NDI0 452 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 NR1I3Q14994 352 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 ZNF569Q5MCW4 686 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 STAG2Q8N3U4 1231 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 FHOD1Q9Y613 1164 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 MYH2Q9UKX2 1941 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 COL4A1P02462 1669 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 TADA3O75528 432 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 H2AFXP16104 143 aaPredicted RBP19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 TBX2Q13207 712 aaPredicted RBP19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 BRMS1Q9HCU9 246 aa19.32■□□□□ 0.68
SNRNP70-202ENST00000401730 UIMC1Q96RL1 719 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 SAP30BPQ9UHR5 308 aaKnown RBP19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 CCP110O43303 1012 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 FUT2Q10981 343 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 IL17AQ16552 155 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 NUP88Q99567 741 aaPredicted RBP19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 HINFPQ9BQA5 517 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 PHLPP2Q6ZVD8 1323 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 USP17L3A6NCW0 530 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 USP17L4A6NCW7 530 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 BMS1Q14692 1282 aaKnown RBP19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 PARP10Q53GL7 1025 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 USP17L1Q7RTZ2 530 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 VAT1LQ9HCJ6 419 aa19.31■□□□□ 0.68
SNRNP70-202ENST00000401730 STX10O60499 249 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 DIXDC1Q155Q3 683 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 KCND1Q9NSA2 647 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 STX8Q9UNK0 236 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 SPATA1Q5VX52 437 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 MTRQ99707 1265 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 NUP98P52948 1817 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 XDHP47989 1333 aa19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 COL1A1P02452 1464 aaPredicted RBP19.3■□□□□ 0.68
SNRNP70-202ENST00000401730 RTL9Q8NET4 1388 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 BAZ2AQ9UIF9 1905 aaKnown RBP19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 PLA2G4AP47712 749 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 KIF4BQ2VIQ3 1234 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 TMTC3Q6ZXV5 915 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 SLF1Q9BQI6 1058 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 PPP1R3GB7ZBB8 358 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 PRPF3O43395 683 aaKnown RBP19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 RHOXF2BP0C7M4 288 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 TFAP4Q01664 338 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 NPY5RQ15761 445 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 WWC2Q6AWC2 1192 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 RHOXF2Q9BQY4 288 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 DCP1AQ9NPI6 582 aaPredicted RBP19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 TRIM10Q9UDY6 481 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 SHANK3Q9BYB0 1731 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 CCDC175P0C221 793 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 KANK3Q6NY19 840 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 NEK11Q8NG66 645 aa19.29■□□□□ 0.68
SNRNP70-202ENST00000401730 SASH3O75995 380 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 NSUN4Q96CB9 384 aaKnown RBP19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 PARD6BQ9BYG5 372 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 ARGLU1Q9NWB6 273 aaPredicted RBP19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 FAM205AQ6ZU69 1335 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 A0A1B0GTH6 734 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 KRT31Q15323 416 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 FILIP1LQ4L180 1135 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 NT5DC1Q5TFE4 455 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 HEATR3Q7Z4Q2 680 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 PLEKHG2Q9H7P9 1386 aa19.28■□□□□ 0.68
SNRNP70-202ENST00000401730 FAM98CQ17RN3 349 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 ZNF579Q8NAF0 562 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 SUGCTQ9HAC7 445 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 SCG2P13521 617 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 USP5P45974 858 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 INF2Q27J81 1249 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 APTXQ7Z2E3 356 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 DZIP1Q86YF9 867 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 LINC00116Q8NCU8 138 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 NELFBQ8WX92 580 aa19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 ADD3Q9UEY8 706 aaKnown RBP19.27■□□□□ 0.68
SNRNP70-202ENST00000401730 GYPCP04921 128 aa19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 HIBADHP31937 336 aaKnown RBP19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 GRIK5Q16478 980 aa19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 TYW1BQ6NUM6 668 aa19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 ADGRG1Q9Y653 693 aa19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 CNTNAP5Q8WYK1 1306 aa19.27■□□□□ 0.67
SNRNP70-202ENST00000401730 MCM6Q14566 821 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 CHP1Q99653 195 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 MKNK2Q9HBH9 465 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 RPS8P62241 208 aaKnown RBP19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 SLC35F6Q8N357 371 aa19.26■□□□□ 0.67
SNRNP70-202ENST00000401730 IQUBQ8NA54 791 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms