RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 NBPF3Q9H094 633 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 DDX4Q9NQI0 724 aaKnown RBP18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 KIAA1468Q9P260 1216 aa18.32■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CLRN2A0PK11 232 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SMTNL1A8MU46 457 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SH2B2O14492 632 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CTIFO43310 598 aaKnown RBP18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CPLX2Q6PUV4 134 aaKnown RBP18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 MAPKAPK5Q8IW41 473 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 AOPEPQ8N6M6 819 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NAPBQ9H115 298 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TAF1DQ9H5J8 278 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 FAM198AQ9UFP1 575 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ENTPD3O75355 529 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TDO2P48775 406 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TBC1D10CQ8IV04 446 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TSC1Q92574 1164 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TMEM87BQ96K49 555 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CCDC94Q9BW85 323 aaPredicted RBP18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 PAXBP1Q9Y5B6 917 aa18.31■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CMA1P23946 247 aa18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 METAP2P50579 478 aaKnown RBP eCLIP18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 PICALMQ13492 652 aa18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SBK1Q52WX2 424 aa18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CTR9Q6PD62 1173 aa18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 PNMA8AQ86V59 439 aaPredicted RBP18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 MCM9Q9NXL9 1143 aa18.3■□□□□ 0.52
CHRFAM7A-203ENST00000401522 KIF28PB7ZC32 967 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TNNT1P13805 278 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 VEGFAP15692 232 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 GSDMDP57764 484 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 FAM83AQ86UY5 434 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 C16orf45Q96MC5 204 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 OSBPL5Q9H0X9 879 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 VEZTQ9HBM0 779 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ARPP21Q9UBL0 812 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ASTN2O75129 1339 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 USP17L12C9JPN9 530 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 USP17L21D6R901 530 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SLC3A2P08195 630 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SLC39A14Q15043 492 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 AXDND1Q5T1B0 1012 aaPredicted RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CYB5R4Q7L1T6 521 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 RAB11FIP4Q86YS3 637 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 IMPACTQ9P2X3 320 aa18.29■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TCP10L2B9ZVM9 353 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ZNF202O95125 648 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NLRP12P59046 1061 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TPM4P67936 248 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TCP10Q12799 353 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TNFAIP1Q13829 316 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 SYCP1Q15431 976 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ANGEL2Q5VTE6 544 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ZFPM1Q8IX07 1006 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 JMYQ8N9B5 988 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 TIGD1Q96MW7 591 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 DHX36Q9H2U1 1008 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 RRAGCQ9HB90 399 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 PGAP2Q9UHJ9 254 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NEDD4P46934 1319 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 PITPNM2Q9BZ72 1349 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 CNTNAP1P78357 1384 aa18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 BAZ2AQ9UIF9 1905 aaKnown RBP18.28■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 DHX8Q14562 1220 aaKnown RBP18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 C12orf60Q5U649 245 aa18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 APOA5Q6Q788 366 aa18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 ANKRD7Q92527 254 aa18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 COL2A1P02458 1487 aaPredicted RBP18.27■□□□□ 0.52
CHRFAM7A-203ENST00000401522 NAV1Q8NEY1 1877 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 A0A087WWV3 80 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CCDC69A6NI79 296 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SKILP12757 684 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PFKFB1P16118 471 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 TNNI2P48788 182 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SGMS1Q86VZ5 419 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 APOBEC3FQ8IUX4 373 aaKnown RBP18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 KCND1Q9NSA2 647 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SAP30BPQ9UHR5 308 aaKnown RBP18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ANAPC4Q9UJX5 808 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ATRNL1Q5VV63 1379 aa18.27■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PPP6R2O75170 966 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 PPARAQ07869 468 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 DPCR1Q3MIW9 517 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 AMOTL1Q8IY63 956 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ERCC4Q92889 916 aaPredicted RBP18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GJB4Q9NTQ9 266 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 GGA3Q9NZ52 723 aa18.26■□□□□ 0.51
CHRFAM7A-203ENST00000401522 MINDY4BA8MYZ0 360 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 ZBTB43O43298 467 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 KRT40Q6A162 431 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 SH3BP5LQ7L8J4 393 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 IGDCC4Q8TDY8 1250 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 MYH1P12882 1939 aa18.25■□□□□ 0.51
CHRFAM7A-203ENST00000401522 CYP2D7A0A087X1C5 515 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms