RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 SUFUQ9UMX1 484 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 EP400Q96L91 3159 aa19.24■□□□□ 0.67
PTPRA-205ENST00000399903 BTBD18B2RXH4 712 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 IRAK1P51617 712 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 GIMAP7Q8NHV1 300 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 CTCFLQ8NI51 663 aaPredicted RBP19.23■□□□□ 0.67
PTPRA-205ENST00000399903 ENOX1Q8TC92 643 aaKnown RBP19.23■□□□□ 0.67
PTPRA-205ENST00000399903 PANX2Q96RD6 677 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 AGXT2Q9BYV1 514 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 JCADQ9P266 1359 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 MFAP3LO75121 409 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 IARSP41252 1262 aaKnown RBP19.23■□□□□ 0.67
PTPRA-205ENST00000399903 KCTD16Q68DU8 428 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 SND1Q7KZF4 910 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPRA-205ENST00000399903 MED15Q96RN5 788 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 PSMB7Q99436 277 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 CAPS2Q9BXY5 557 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 SENP2Q9HC62 589 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 CEP83Q9Y592 693 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 ZNF18P17022 549 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 PSEN1P49768 467 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 PTPAQ15257 358 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 GBP6Q6ZN66 633 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 JADE2Q9NQC1 790 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 TAB2Q9NYJ8 693 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 TTF2Q9UNY4 1162 aaKnown RBP19.23■□□□□ 0.67
PTPRA-205ENST00000399903 ABCC6O95255 1503 aa19.23■□□□□ 0.67
PTPRA-205ENST00000399903 CDHR2Q9BYE9 1310 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 NDUFAB1O14561 156 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 MYBL2P10244 700 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 SIK1P57059 783 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 RUFY1Q96T51 708 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 PIH1D3Q9NQM4 214 aaKnown RBP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 SH3TC1Q8TE82 1336 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 LAMB4A4D0S4 1761 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 ABCA3Q99758 1704 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 FOXP2O15409 715 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 SSBP05455 408 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 RDXP35241 583 aaKnown RBP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 KRT9P35527 623 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 USP8P40818 1118 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 TRIM28Q13263 835 aaKnown RBP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 SUGP1Q8IWZ8 645 aaKnown RBP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 C8orf37Q96NL8 207 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 CHP1Q99653 195 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 GPR108Q9NPR9 543 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 SYNRGQ9UMZ2 1314 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 ZNF185O15231 689 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 PPP6R2O75170 966 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 INTS5Q6P9B9 1019 aaKnown RBP19.22■□□□□ 0.67
PTPRA-205ENST00000399903 OTUD6BQ8N6M0 293 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 WWC3Q9ULE0 1092 aa19.22■□□□□ 0.67
PTPRA-205ENST00000399903 TJP1Q07157 1748 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 ERVK-24P63145 666 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 SELENOOQ9BVL4 669 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 GNL3LQ9NVN8 582 aaKnown RBP19.21■□□□□ 0.67
PTPRA-205ENST00000399903 GPAA1O43292 621 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 GYPCP04921 128 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 ATP1A1P05023 1023 aaKnown RBP19.21■□□□□ 0.67
PTPRA-205ENST00000399903 CHRM1P11229 460 aaPredicted RBP19.21■□□□□ 0.67
PTPRA-205ENST00000399903 ANTXR2P58335 489 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 PDCLQ13371 301 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 RASGRP2Q7LDG7 609 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 KIAA1328Q86T90 577 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 CNGA4Q8IV77 575 aa19.21■□□□□ 0.67
PTPRA-205ENST00000399903 C2orf54Q08AI8 447 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 CCDC122Q5T0U0 273 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 COG1Q8WTW3 980 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 EEF2KMTQ96G04 330 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 CD248Q9HCU0 757 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 CTNND2Q9UQB3 1225 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 A0A1B0GTH6 734 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 RNF225M0QZC1 329 aaPredicted RBP19.2■□□□□ 0.66
PTPRA-205ENST00000399903 USP14P54578 494 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 SAFBQ15424 915 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPRA-205ENST00000399903 KCNV1Q6PIU1 500 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 GOLGA8AA7E2F4 631 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 B4E1Z4 1266 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 PRPF6O94906 941 aaKnown RBP19.2■□□□□ 0.66
PTPRA-205ENST00000399903 RRP12Q5JTH9 1297 aaKnown RBP19.2■□□□□ 0.66
PTPRA-205ENST00000399903 CEP89Q96ST8 783 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 CCDC87Q9NVE4 849 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 UBR2Q8IWV8 1755 aa19.2■□□□□ 0.66
PTPRA-205ENST00000399903 PDE8AO60658 829 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 PLCD1P51178 756 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 SPATA31A1Q5TZJ5 1347 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 MACROD2A1Z1Q3 448 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 FRMD3A2A2Y4 597 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 SLC7A5Q01650 507 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 AIDAQ96BJ3 306 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 SAR1BQ9Y6B6 198 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 PALLDQ8WX93 1383 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 NUP188Q5SRE5 1749 aa19.19■□□□□ 0.66
PTPRA-205ENST00000399903 PDE8BO95263 885 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 CD44P16070 742 aaKnown RBP19.18■□□□□ 0.66
PTPRA-205ENST00000399903 DNA2P51530 1060 aa19.18■□□□□ 0.66
PTPRA-205ENST00000399903 NR5A1Q13285 461 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms