RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 MIS12Q9H081 205 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 MRPL44Q9H9J2 332 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 FBXO40Q9UH90 709 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 ARHGEF40Q8TER5 1519 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 TULP4Q9NRJ4 1543 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 TMC6Q7Z403 805 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 MICAL1Q8TDZ2 1067 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 FBXO41Q8TF61 875 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 JAKMIP2Q96AA8 810 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 FER1L4A9Z1Z3 1794 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 SYCE3A1L190 88 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 FAM47AQ5JRC9 791 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 C20orf194Q5TEA3 1177 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 TPH2Q8IWU9 490 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 BSDC1Q9NW68 430 aaPredicted RBP8.87□□□□□ -0.99
USP47-203ENST00000399455 HOXC10Q9NYD6 342 aa8.87□□□□□ -0.99
USP47-203ENST00000399455 MBD5Q9P267 1494 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 TTC38Q5R3I4 469 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 MAEAQ7L5Y9 396 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 SLC16A10Q8TF71 515 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 ATP6V0A1Q93050 837 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 SMCO2A6NFE2 343 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 KBTBD13C9JR72 458 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 E7EVH7 732 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 GCNT3O95395 438 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 KRT9P35527 623 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 SKIV2LQ15477 1246 aaKnown RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 GREM2Q9H772 168 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 LRWD1Q9UFC0 647 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 RNF17Q9BXT8 1623 aaKnown RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 M0R2C6 588 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 PRDM1O75626 825 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 MYCP01106 439 aaPredicted RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 MTERF4Q7Z6M4 381 aaKnown RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 PPFIA3O75145 1194 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 ATP5JP18859 108 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 TBC1D10BQ4KMP7 808 aaPredicted RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 XKR9Q5GH70 373 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 PRPF31Q8WWY3 499 aaKnown RBP8.86□□□□□ -0.99
USP47-203ENST00000399455 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 CCDC129Q6ZRS4 1044 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 ATP6V0A2Q9Y487 856 aa8.86□□□□□ -0.99
USP47-203ENST00000399455 hCG_1984214I3L0E3 225 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 VIMP08670 466 aaKnown RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 KRT83P78385 493 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 SEL1L2Q5TEA6 688 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ZNF713Q8N859 430 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 IPO4Q8TEX9 1081 aaKnown RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 CCDC77Q9BR77 488 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 SLC8A2Q9UPR5 921 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 PCDHA1Q9Y5I3 950 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ELP1O95163 1332 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ABL1P00519 1130 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 HLTFQ14527 1009 aaKnown RBP eCLIP8.85□□□□□ -0.999e-7■■■□□ 18.1
USP47-203ENST00000399455 PLA2G4DQ86XP0 818 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 URGCPQ8TCY9 931 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 TRAF5O00463 557 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 PLCB3Q01970 1234 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 AOC3Q16853 763 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 FOXP4Q8IVH2 680 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 AMNQ9BXJ7 453 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 CACYBPQ9HB71 228 aaKnown RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 JADE2Q9NQC1 790 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ZNF277Q9NRM2 450 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 PCDHB13Q9Y5F0 798 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 BCRP11274 1271 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ELF1P32519 619 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 NT5C2P49902 561 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 POLA2Q14181 598 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 TMX3Q96JJ7 454 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ALKQ9UM73 1620 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 IGSF1Q8N6C5 1336 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 USP17L12C9JPN9 530 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 USP17L21D6R901 530 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 SLC27A2O14975 620 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 RAPGEF1Q13905 1077 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 PLIN2Q99541 437 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 FAM204AQ9H8W3 233 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 PDE8BO95263 885 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 KRT10P13645 584 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 ZNF157P51786 506 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 UBXN1Q04323 297 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 RC3H1Q5TC82 1133 aaKnown RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 ISM2Q6H9L7 571 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 CCT6BQ92526 530 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 STMN4Q9H169 189 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 SEPT9Q9UHD8 586 aaPredicted RBP8.85□□□□□ -0.99
USP47-203ENST00000399455 TPCN1Q9ULQ1 816 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 CDC42BPBQ9Y5S2 1711 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 PHLPP2Q6ZVD8 1323 aa8.85□□□□□ -0.99
USP47-203ENST00000399455 CETN3O15182 167 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 UBASH3AP57075 661 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 NLRP7Q8WX94 980 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 ATG3Q9NT62 314 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 GNA14O95837 355 aa8.84□□□□□ -0.99
USP47-203ENST00000399455 ASNSP08243 561 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 175.3 ms