RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 WDR19Q8NEZ3 1342 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 UNCXA6NJT0 531 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 USP14P54578 494 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 SPP2Q13103 211 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 IKQ13123 557 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 RRP1BQ14684 758 aaKnown RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 CCDC96Q2M329 555 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 SHROOM1Q2M3G4 852 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 NOL9Q5SY16 702 aaKnown RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 CCDC84Q86UT8 332 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 DGKHQ86XP1 1220 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 CLEC10AQ8IUN9 316 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 ENAHQ8N8S7 591 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 ZNF280CQ8ND82 737 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 OPTNQ96CV9 577 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 ZFP91Q96JP5 570 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 TTC14Q96N46 770 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 TBC1D2Q9BYX2 928 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 TCP11L1Q9NUJ3 509 aa10.45□□□□□ -0.74
BRCC3-206ENST00000399042 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.45□□□□□ -0.74
BRCC3-206ENST00000399042 ECM29Q5VYK3 1845 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 PASKQ96RG2 1323 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 USP17L10C9JJH3 530 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 SH2B2O14492 632 aaPredicted RBP10.44□□□□□ -0.74
BRCC3-206ENST00000399042 ANP32AP39687 249 aaKnown RBP10.44□□□□□ -0.74
BRCC3-206ENST00000399042 APLP1P51693 650 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 ANTXR2P58335 489 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 EXOSC10Q01780 885 aaKnown RBP10.44□□□□□ -0.74
BRCC3-206ENST00000399042 PPATQ06203 517 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 APOBRQ0VD83 1088 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 MTMR2Q13614 643 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 MAP3K11Q16584 847 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 LDLRAD1Q5T700 205 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 RGMBQ6NW40 437 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 GADL1Q6ZQY3 521 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 HSCBQ8IWL3 235 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 PNMA1Q8ND90 353 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 IL27Q8NEV9 243 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 CTCFLQ8NI51 663 aaPredicted RBP10.44□□□□□ -0.74
BRCC3-206ENST00000399042 TMEM47Q9BQJ4 181 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 LARP6Q9BRS8 491 aaKnown RBP10.44□□□□□ -0.74
BRCC3-206ENST00000399042 MTA3Q9BTC8 594 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 IL17RBQ9NRM6 502 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 NYAP2Q9P242 653 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 SNCAIPQ9Y6H5 919 aa10.44□□□□□ -0.74
BRCC3-206ENST00000399042 SSC5DA1L4H1 1573 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CPLX1O14810 134 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 ZBTB43O43298 467 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 DHX16O60231 1041 aaKnown RBP10.43□□□□□ -0.74
BRCC3-206ENST00000399042 HSP90AA1P07900 732 aaKnown RBP10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CALM1P0DP23 149 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CALM2P0DP24 149 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CALM3P0DP25 149 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 LIFRP42702 1097 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 ECE1P42892 770 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 SLC1A4P43007 532 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 MCM2P49736 904 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 AK2P54819 239 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 JAG1P78504 1218 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 STK3Q13188 491 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 SNAPC2Q13487 334 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 SLFN13Q68D06 897 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 USP17L2Q6R6M4 530 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 SAPCD2Q86UD0 394 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 MICU3Q86XE3 530 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 RAB11FIP4Q86YS3 637 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CCDC144CPQ8IYA2 1237 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 SPICE1Q8N0Z3 855 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 ACER1Q8TDN7 264 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 IGDCC4Q8TDY8 1250 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CCDC102AQ96A19 550 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
BRCC3-206ENST00000399042 LY9Q9HBG7 655 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 GPHNQ9NQX3 736 aaPredicted RBP10.43□□□□□ -0.74
BRCC3-206ENST00000399042 CTDP1Q9Y5B0 961 aaPredicted RBP10.43□□□□□ -0.74
BRCC3-206ENST00000399042 TLL2Q9Y6L7 1015 aa10.43□□□□□ -0.74
BRCC3-206ENST00000399042 PLIN4Q96Q06 1357 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 IGKV6D-41A0A0C4DH26 115 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 SPDYE5A6NIY4 337 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 GOLGA8AA7E2F4 631 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 C19orf81C9J6K1 198 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 IRF6O14896 467 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 PARP1P09874 1014 aaKnown RBP10.42□□□□□ -0.74
BRCC3-206ENST00000399042 KIF5BP33176 963 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 GUCY1A2P33402 732 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 METAP2P50579 478 aaKnown RBP eCLIP10.42□□□□□ -0.74
BRCC3-206ENST00000399042 GTF2A2P52657 109 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 HMGCS2P54868 508 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 BACE1P56817 501 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 PPIL2Q13356 520 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 BECN1Q14457 450 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 DEFB115Q30KQ5 88 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 CPLX2Q6PUV4 134 aaKnown RBP10.42□□□□□ -0.74
BRCC3-206ENST00000399042 ZNF654Q8IZM8 581 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 NKX2-3Q8TAU0 364 aa10.42□□□□□ -0.74
BRCC3-206ENST00000399042 WNK4Q96J92 1243 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms